 |
Job Description | P0A8Y3 | Confidence | 93.47% | Date | Thu Jan 5 11:08:58 GMT 2012 |
Rank | 146 | Aligned Residues | 102 |
% Identity | 12% | Template | c3rfuC_ |
PDB info |
PDB header:hydrolase, membrane protein | Chain: C: PDB Molecule:copper efflux atpase; |
PDBTitle: crystal structure of a copper-transporting pib-type atpase
|
Resolution | 3.20 Å |
|
 |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | R | P | E | V | I | A | I | M | H | K | L | R | E | Q | G | H | R | V | V | V | L | S | N | T | N | R | L | H | T | T | F | W | P | E | E | Y | P | E | I | R | D | A | A | D | H | I | Y | L | S | Q | D | L | G | M | R | K | P | E | A | R | I | Y | Q | H | V | L | Q | A | E | G | F | S | P | S | D | T | V | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|
Template Sequence |   |
P | I | K | S | S | T | P | E | T | I | L | E | L | Q | Q | S | G | I | E | I | V | M | L | T | G | D | S | K | R | T | A | E | A | V | A | G | T | L | G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | K | V | V | A | E | I | M | P | E | D | K | S | R | I | V | S | E | L | K | D | K | G | L | I | V | A | M |
Template Known Secondary structure |   |
| B |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
554 | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . |
  |
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | D | D | N | A | D | N | I | E | G | A | N | Q | L | G | I | T | S | I | L | V | K | D | K | T | T | I | P | D | Y | F | A | K | V | L |
Query Conservation |   |
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|
| . |
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
Template Sequence |   |
A | G | D | G | V | N | D | A | P | A | L | A | K | A | D | I | . |
G | I | A | M | G | T | G | T | D | V | A | I | E | S | A | G | V | T |
Template Known Secondary structure |   |
 |  |
| S | S | T | T |  |  |  |  |  |  | S | S |  | . |  |  |  |  | S | S | S |
| S |  |  |  |  |  |
| S |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
622 | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | |
. | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|