Job Description P0A8Y3 Confidence 97.33% Date Thu Jan 5 11:08:58 GMT 2012 Rank 131 Aligned Residues 137 % Identity 15% Template c3bwvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative 5'(3')-deoxyribonucleotidase; PDBTitle: crystal structure of deoxyribonucleotidase-like protein (np_764060.1)2 from staphylococcus epidermidis atcc 12228 at 1.55 a resolution Resolution 1.55 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	F	D	L	G	N	V	I	V	D	I	D	F	N	R	V	L	G	A	W	S	D	L	T	R	I	P	L	A	S	L	K	K	S	F	H	M	G	E	A	F	H	Q	H	E	R	G	E	I	S	D	E	A	F	A	E	A	L	C	H	E	M	A	L	P	L	S	Y	E	Q	F	S	H	G	W	Q	A	V	F
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	I	D	X	D	E	V	L	A	D	T	L	G	A	V	V	K	A	V	N	E	R	A	D	L	N	I	K	X	E	S	L	N	G	K	K	L	G	L	V	X	D	I	L	K	E	P	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	N
Template Known Secondary structure							B	T	T	T	B														T	T					G	G	G	G	T	T	S											S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																												.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		V	A	L	R	P	E	V	I	A	I	M	H	K	L	R	E	Q	G	H	R	V	V	V	L	S	N	.	.	.	.	.	T	N	R	L	H	T	T	F	W	P	E	E	Y	P	E	I	R	D	A	A	D	H	I	Y	L	S	Q	D	L	G	M	R	K	P	E	A	R	I	Y	Q	H	V	L	Q	A	E	G	F	S
Query Conservation																												.	.	.	.	.
Alig confidence																			.									.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	V	X	P	H	A	Q	E	V	V	K	Q	L	N	E	H	.	Y	D	I	Y	I	A	T	A	A	X	D	V	P	T	S	F	H	D	K	Y	E	W	L	L	E	Y	F	P	F	L	D	P	Q	H	F	V	F	C	G	R	K	N	I	I	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				B		T	T									T	T	T	.	S								S	S	S	S	G	G	G													T	T	S		G	G	G					S	S	G	G	G				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	D	T	V	F	F	D	D	N	A	D	N	I	E	G	A	N	Q	L	G	I	T	S	I	L	V	K	D	K	T	T
Query Conservation
Alig confidence		.	.	.	.										.	.	.
Template Conservation		.	.	.	.										.	.	.
Template Sequence		.	.	.	.	Y	L	I	D	D	N	P	K	Q	.	.	.	L	E	I	F	E	G	K	S	I	X	F	T	A	S	H	N
Template Known Secondary structure		.	.	.	.					S					.	.	.		T	T		S	S								G	G	G
Template Predicted Secondary structure		.	.	.	.										.	.	.
Template SS confidence
						131	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions