Job Description P0A8Y3 Confidence 99.31% Date Thu Jan 5 11:08:58 GMT 2012 Rank 80 Aligned Residues 163 % Identity 11% Template c2i7dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+ Resolution 1.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	Y	I	F	D	L	G	N	V	I	V	D	I	D	F	N	R	V	L	G	A	W	S	D	L	T	R	I	P	L	A	S	L	K	K	S	F	H	M	G	E	A	F	H	Q	H	E	R	G	E	I	S	D	E	A	F	A	E	A	L	C	H	E	M	A	L	P	L	S	Y	E	Q	F	S	H	G	W	Q	A
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	V	L	V	D	M	D	G	V	L	A	D	F	E	A	G	L	L	R	G	F	R	R	R	F	P	E	E	P	H	V	P	L	E	Q	R	R	G	F	L	A	R	E	Q	Y	R	A	L	R	P	D	L	A	D	K	V	A	S	V	Y	E	A	P	G	F	F	L	D	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	B	T	T	T	B														S	T	T	S					G	G	G			S	S											T	T										T	S	T	T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	F	V	A	L	R	P	E	V	I	A	I	M	H	K	L	R	E	.	Q	G	H	R	V	V	V	L	S	N	T	N	R	L	H	T	T	F	W	P	E	E	Y	P	E	I	R	D	A	A	D	H	I	Y	L	S	Q	D	L	G	M	R	K	P	E	A	R	I	Y	Q	H	V	L	Q	A	E	G	F	S	P	S
Query Conservation																				.
Alig confidence		.	.																	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	L	E	P	I	P	G	A	L	D	A	V	R	E	M	N	D	L	P	D	T	Q	V	F	I	C	T	S	P	L	L	K	Y	H	H	C	V	G	E	K	Y	R	W	V	E	Q	H	L	.	.	.	.	.	.	.	.	.	.	.	G	P	Q	F	V	E	R	I	I	L	T	R	D	K	T	V	V	L	G	D
Template Known Secondary structure		.	.			B		T	T											S	T	T											S	S		T	T	T													.	.	.	.	.	.	.	.	.	.	.						T	T					S		G	G	G	S			S
Template Predicted Secondary structure		.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120												.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	V	F	F	D	D	N	A	D	N	I	E	G	A	N	Q	L	G	I	T	S	I	L	V	K	D	K	T	T
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	L	I	D	D	K	D	T	V	R	G	Q	E	E	T	P	S	W	E	H	I	L	F	T	C	C	H	N
Template Known Secondary structure		.	.						S	S				S	S		S	S		S	S								G	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions