Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8Y3
Confidence97.58%DateThu Jan 5 11:08:58 GMT 2012
Rank129Aligned Residues97
% Identity21%Templatec1yj5B_
PDB info PDB header:transferaseChain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100........ .110.........120.........130.........140.........150.....
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Query Sequence  LRPEVIAIMHKLREQGHRVVVLSN. . . . . . . . . TNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEG
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Template Sequence  LYPEIPKKLQELAAEGYKLVIFTNQXGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGXWDHLQEQAN
Template Known Secondary structure  S
TTTT
TTSS
TS


SSSSSSTTSTTTS
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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   156...160...... ...170.........180.
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Query Sequence  . . . . FSPSDTVFFDD. . . . . . . . . . . . . . . . . NADNIEGANQLGITS
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Template Sequence  EGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF
Template Known Secondary structure  SS



STT

S
S
B
TTSSTT

S

S

T

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   274.....280.........290.........300.........310.........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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