 |
Job Description | P39352 | Confidence | 2.25% | Date | Thu Jan 5 11:59:40 GMT 2012 |
Rank | 44 | Aligned Residues | 50 |
% Identity | 4% | Template | d1jmxa1 |
SCOP info | Cytochrome c
| Cytochrome c
| Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
|
Resolution | 1.90 |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | A | W | Y | K | Q | V | N | P | P | Q | R | K | A | L | F | S | A | W | L | G | Y | V | F | D | G | F | D | F | M | M | I | F | Y | I | L | H | I | I | K | A | D | L | G | I | T | D | I | Q |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|   |
|
Template Sequence |   |
S | R | I | S | H | Q | R | K | T | P | E | G | W | L | M | S | I | A | R | M | Q | V | M | H | G | L | Q | I | S | D | D | D | R | R | T | L | V | K | Y | L | A | D | K | Q | G | L | A | P | S | E |
Template Known Secondary structure |   |
T | T | G | G | G |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| G | G | G |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|