Job Description P39352 Confidence 3.90% Date Thu Jan 5 11:59:40 GMT 2012 Rank 17 Aligned Residues 198 % Identity 9% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	K	D	K	S	T	F	L	S	V	F	R	K	P	H	L	S	I	S	M	I	V	F	L	V	C	F	C	L	F	G	A	N	W	P	I	N	G	L	L	P	S	Y	L	A	D	N	G	V	N	T	V	V	I	S	T	L	M	T	I	A	G	L	G	T	L	T	G	T	I	F	F	G	F	V	G	D	K	I
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.
Template Sequence		R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	.	.	.	.	.	.	.	.	.	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L
Template Known Secondary structure			T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S	.	.	.	.	.	.	.	.	.																													T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	K	K	A	F	V	V	G	L	I	T	S	F	I	F	L	C	P	L	F	F	I	S	V	K	N	S	S	L	I	G	L	C	L	F	G	L	M	F	T	N	L	G	I	A	G	L	V	P	K	F	I	Y	D	Y	F	P	T	K	L	R	G	L	G	T	G	L	I	Y	N	L	G	A	T	G	G	M	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G
Template Known Secondary structure		S	T	T											G	G	G						T	T	T	T	T	T	T		S																																				T	T						T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		359	360	.	.	.	.	.								.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		P	V	L	A	T	Y	I	.	.	.	.	.	.	.	S	G	Y	Y	G	L	G	V	S	L	F	I	V	T	V	A	F	S	A	L	L	I	L	L	V	G	F	D	I	P	G	K	I	Y	K	L	S	V	A	K
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E
Template Known Secondary structure																																													T	S	T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions