|   |
7 | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
G | D | I | A | P | K | F | S | L | P | D | . |
Q | D | G | E | Q | V | N | L | T | D | F | Q | G | Q | R | V | L | V | Y | F | Y | P | K | A | M | T | P | G | C | T | V | Q | A | C | G | L | R | D | N | M | D | E | L | K | K | A | G | V | D | V | L | G | I | S | T | D | . |
. |
. |
. |
. |
. |
. |
K | P | E | K | L |
Query Conservation |   |
|   |   |
|
|
|
|   |
|   |   | . |   |   |
|   |   |   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
N | A | P | L | L | E | L | D | V | Q | E | W | V | N | H | E | G | L | S | N | E | D | L | R | G | K | V | V | V | V | E | V | F | Q | X | L | C | P | G | C | V | N | H | G | V | P | Q | A | Q | K | I | H | R | X | I | D | E | S | Q | V | Q | V | I | G | L | H | S | V | F | E | H | H | D | V | X | T | P | E | A | L |
Template Known Secondary structure |   |
S |
|
| B |
|
|
|
|  |  |  |  | S | S | S |
|
|
|
|  |  |  |  | T | T | S |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T |  |  |  |  |  |  |  |
|
|
| S |
| T | T | T | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | F | A | E | K | E | L | L | N | F | T | L | L | S | D | E | D | H | . |
. |
. |
. |
. |
. |
Q | V | C | E | Q | F | G | V | W | G | E | K | S | F | M | G | K | T | Y | D | G | I | H | R | I | S | F | L | I | D | A | D | G | K | I | E | H | V | F | D | D | F | K | T | S | N | H | H | D | V | V | L | N | W | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
K | V | F | I | D | E | F | G | I | K | F | P | V | A | V | D | X | P | R | E | G | Q | R | I | P | S | T | X | K | K | Y | R | L | E | G | T | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | I | I | L | A | D | R | K | G | R | I | R | Q | V | Q | F | G | Q | V | D | D | F | V | L | G | L | L | L | G | S | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |
|
|
| T | T |
| S | S |
|  |  |  |  |  | T | T |
|
| S | S | S | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| T | T |
| B |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
  |   |
153 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
K | E | H | A |
Query Conservation |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |
|   |
Template Sequence |   |
L | S | E | T |
Template Known Secondary structure |   |
 |  |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
Template SS confidence |   |
|
|
|
|
  |   |
154 | . | . | . |
  |