 |
Job Description | P0AE52 | Confidence | 99.90% | Date | Thu Jan 5 11:22:32 GMT 2012 |
Rank | 50 | Aligned Residues | 135 |
% Identity | 25% | Template | c3gl3D_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:putative thiol:disulfide interchange protein |
PDBTitle: crystal structure of a putative thiol:disulfide interchange2 protein dsbe from chlorobium tepidum
|
Resolution | 2.09 Å |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | I | A | P | K | F | S | L | P | D | Q | D | G | E | Q | V | N | L | T | D | F | Q | G | Q | R | V | L | V | Y | F | Y | P | K | A | M | T | P | G | C | T | V | Q | A | C | G | L | R | D | N | M | D | E | L | K | K | A | G | V | D | V | L | G | I | S | T | D | K | P | E | K | L | S | R | F | A | E | K | E | L |
Query Conservation |   |
|   |   |
|
|
|
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   | . |   |   |
|   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | D | K | A | P | D | F | A | L | P | G | K | T | G | V | . |
V | K | L | S | D | K | T | G | S | V | V | Y | L | D | F | W | A | S | W | C | G | P | C | R | Q | S | F | P | W | X | N | Q | X | Q | A | K | Y | K | A | K | G | F | Q | V | V | A | V | N | L | D | A | K | T | G | D | A | X | K | F | L | A | Q | V | P |
Template Known Secondary structure |   |
| S |
|
|
|
|
|  |  |  | B | S | S | S |  | . |  |  | G | G | G | G | T | T | S |  |  |  |  |  |  |  |
| T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  | T | T | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | F | T | L | L | S | D | E | D | H | Q | V | C | E | Q | F | G | V | W | G | E | K | S | F | M | G | K | T | Y | D | G | I | H | R | I | S | F | L | I | D | A | D | G | K | I | E | H | V | F | D | D | F | K | T | S | N | H | H | D | V | V | L | N | W | L | K | E | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
A | E | F | T | V | A | F | D | P | K | G | Q | T | P | R | L | Y | G | V | K | G | X | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | S | F | L | I | D | R | N | G | K | V | L | L | Q | H | V | G | F | . |
R | P | A | D | K | E | A | L | E | Q | Q | I | L | A | A |
Template Known Secondary structure |   |
|
| S |  |  |  |  |
| T | T |
|  |  |  |  |  | T | T |
|
| S | S | S | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| T | T | S | S |
| S |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | |
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|