Job Description P0AE52 Confidence 99.87% Date Thu Jan 5 11:22:32 GMT 2012 Rank 68 Aligned Residues 151 % Identity 22% Template c2k6vA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:putative cytochrome c oxidase assembly protein; PDBTitle: solution structures of apo sco1 protein from thermus2 thermophilus Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		P	L	K	A	G	D	I	A	P	K	F	S	L	P	D	Q	D	G	E	Q	V	N	L	T	D	F	Q	G	Q	R	V	L	V	Y	F	Y	P	K	A	M	T	P	G	C	T	V	Q	A	C	G	L	R	D	N	M	D	E	L	K	K	A	.	.	.	.	.	.	.	G	V	D	V	L	G	I	S	T	D	K	P
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence																				.																																											.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		T	R	L	L	N	P	K	P	V	D	F	A	L	E	G	P	Q	G	.	P	V	R	L	S	Q	F	Q	D	K	V	V	L	L	F	F	G	F	T	R	C	P	D	V	C	P	T	T	L	L	A	L	K	R	A	Y	E	K	L	P	P	K	A	Q	E	R	V	Q	V	I	F	V	S	V	D	P	E	R	D	P	P
Template Known Secondary structure																	S	S	S	.				G	G	G	S	T	T	S									T	T		S	S														T	T	S						T	T								S		T	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																							.	.	.																			.	.
Query SS confidence																							.	.	.																			.	.
Query Sequence		E	K	L	S	R	F	A	E	K	E	L	L	N	F	T	L	L	S	D	E	D	.	.	.	H	Q	V	C	E	Q	F	G	V	W	G	E	K	S	F	M	G	K	.	.	T	Y	D	G	I	H	R	I	S	F	L	I	D	A	D	G	K	I	E	H	V	F	D	D	F	K	T	S	N	H	H	D	V	V	L	N
Query Conservation																							.	.	.																			.	.
Alig confidence																							.	.	.																			.	.																									.
Template Conservation																																																																						.
Template Sequence		E	V	A	D	R	Y	A	K	A	F	H	P	S	F	L	G	L	S	G	S	P	E	A	V	R	E	A	A	Q	T	F	G	V	F	Y	Q	K	S	Q	Y	R	G	P	G	E	Y	L	V	D	H	T	A	T	T	F	V	V	K	E	G	R	L	V	L	L	Y	S	P	.	D	K	A	E	A	T	D	R	V	V	A
Template Known Secondary structure													T	T																			T											T	T															T	T									.				T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.
		151	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	K	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	Q	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions