|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
M | N | P | L | K | A | G | D | I | A | P | K | F | S | . |
. |
. |
. |
. |
L | P | D | Q | D | G | E | Q | V | N | L | T | D | F | Q | G | Q | R | V | L | V | Y | F | Y | P | K | A | M | T | P | G | C | T | V | Q | A | C | G | L | R | D | N | M | D | E | L | K | K | A | G | V | D | V | L | G | I | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |
|
|   |   |
|
|
|
|   | . | . | . | . | . |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|   |
|
| . |
|   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |
|   |   |   |
|   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |
Template Sequence |   |
A | A | Q | L | E | S | C | G | T | A | P | D | L | K | G | I | T | G | W | L | N | T | P | G | N | K | P | I | D | L | K | S | L | R | G | K | V | V | L | I | D | F | W | . |
A | Y | S | C | I | N | C | Q | R | A | I | P | H | V | V | G | W | Y | Q | A | Y | K | D | S | G | L | A | V | I | G | V | H | T | P | E | Y |
Template Known Secondary structure |   |
| S | S |
|
|
|
|
| B |
|
|
|
|
| S |
|
|  |  |  | S | S | G | G | G |
|
|
|
| G | G | G | G | T | T | S |  |  |  |  |  |  |  | . |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
391 | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | |
. | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
S | T | D | K | P | E | K | L | S | R | F | A | E | K | E | L | L | N | F | T | L | L | S | D | E | D | H | Q | V | C | E | Q | F | G | V | W | G | E | K | S | F | M | G | K | T | Y | D | G | I | H | R | I | S | F | L | I | D | A | D | G | K | I | E | H | V | F | D | D | F | K | T | S | N | H | H | D | V | V | L |
Query Conservation |   |
. |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
| . | . | . |
|   |
|   |   |   |
|
|
Template Sequence |   |
A | F | E | K | V | P | G | N | V | A | K | G | A | A | N | L | G | I | S | Y | P | I | A | L | D | N | N | Y | A | T | W | T | N | Y | R | N | R | Y | W | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | Y | L | I | D | A | T | G | T | V | R | H | I | K | F | G | . |
. |
. |
E | G | D | Y | N | V | T | E |
Template Known Secondary structure |   |
G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  |
| T | T | S |  |  |  |  |  | T | T |
|
| S | S | S | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| T | T | S | B |  |  |  |  |  |  | S | . | . | . | S |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | |
|
|
. | . | . | 530 | . | . | . | . |
  |
  |   |
150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
N | W | L | K | E | H |
Query Conservation |   |
  |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
Template Sequence |   |
T | L | V | R | Q | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
535 | . | . | . | . | 540 |
  |