Return to main results Retrieve Phyre Job Id

Job DescriptionP45756
Confidence99.72%DateThu Jan 5 12:03:32 GMT 2012
Rank11Aligned Residues212
% Identity15%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20. ........30.........40.... .....50.........60.........70........
Predicted Secondary structure 





..







....















Query SS confidence 
















. .






















. . . .

































Query Sequence  REVILSWLCEKRQTWRL. . CYLLGEAGSGKTWLAQQLQKDKH. . . . RRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSA
Query Conservation     

  
       
 ..
 



 








 
   
 ....        
         

  
           
Alig confidence 
















..






















....

































Template Conservation   
     
   
       


 

 
 


 

  

                                          
Template Sequence  QDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP
Template Known Secondary structure 

TTTT
TT



STTSSTTS
SSS


TTS




Template Predicted Secondary structure 

























Template SS confidence 















































































   42.......50.........60.........70.........80.........90.........100.........110.........120.
 
   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  WTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLT
Query Conservation    
   
   
      
 
  






  
   


 

 
 
      




  
  
    
     

 
 

 
Alig confidence 








........






























































Template Conservation           ........     
   
                          
               
          
Template Sequence  SKHDLENYP. . . . . . . . CPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALD
Template Known Secondary structure 
TTS
........

S
TTGGGS
TTTTS
GGGS
S




Template Predicted Secondary structure  ........






















Template SS confidence 















































































   122.......130 .........140.........150.........160.........170.........180.........190...
 
   159160.........170.........180.........190...... ...200.........210.........220......
Predicted Secondary structure 










.








Query SS confidence 





































.





























Query Sequence  EHELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRR. KLALAGETIRLLQQAEQTSVFTAKQWRMIY
Query Conservation    
   

  

        

  

  
   
 
 

. 

 
 
 

  
       
    
  
 
Alig confidence 

















..

















.





























Template Conservation         
          ..     
  
     

 
  
  
  
   
        

   
 
  
Template Sequence  ASNAIDRLRFISEQENVK. . CDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELA
Template Known Secondary structure  TTT

..

TSS
T
S




Template Predicted Secondary structure 




..












Template SS confidence 




































































   194.....200.........210. ........220.........230.........240.........250.........260
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions