Return to main results Retrieve Phyre Job Id

Job DescriptionP45756
Confidence97.90%DateThu Jan 5 12:03:32 GMT 2012
Rank161Aligned Residues128
% Identity8%Templated1cr2a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 





























....
Query SS confidence 











































































. . . .
Query Sequence  LSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEM. . . .
Query Conservation 
  
       
 
 



 








 
   
         
         

  
             
   ....
Alig confidence 











































































....
Template Conservation 

 
  

  
    
 
  
 




   
        
      
 
                               
Template Sequence  INDKTLGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLIGLHNRVRLRQSDSLKREIIE
Template Known Secondary structure 
SB
TT

STTSSTS


SSS
TT

GGG
Template Predicted Secondary structure 



































Template SS confidence 















































































   295....300.........310.........320.........330.........340.........350.........360.........370....
 
   85....90.........100.........110. ........120.........130....
Predicted Secondary structure  .............................






.





Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . .


























.






















Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AGQLLHALHRTDSRCPLIIIENAHLNH. RRILDDLQRAISLIPDGQFLLIG
Query Conservation  .............................
   
      
 
  






  
 .  


 

 
 
      




Alig confidence  .............................


























.












.








Template Conservation            
     
       

                  




  
   
       
   

 . 
  

 

Template Sequence  NGKFDQWFDELFGNDTFHLYDSFEAETDRLLAKLAYMRSGLGCDVIILDHISIRKMIDNLMTKLKGFAKS. TGVVLVVIC
Template Known Secondary structure  TSSSS






TT

S

.

Template Predicted Secondary structure 





















.


Template SS confidence 















































































   375....380.........390.........400.........410.........420.........430.........440.... .....450...
 
   135..
Predicted Secondary structure 

Query SS confidence 


Query Sequence  RPD
Query Conservation    
Alig confidence 


Template Conservation 
  
Template Sequence  HLK
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 


   465..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions