Job Description P45756 Confidence 98.90% Date Thu Jan 5 12:03:32 GMT 2012 Rank 88 Aligned Residues 165 % Identity 15% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	T	W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	L	A	Q	Q	L	Q	K	D	K	H	R	R	V	I	T	L	S	L	V	V	S	W	Q	G	K	A	A	W	I	V	T	D	D	N	A	A	E	Q	G	C	R	D	S	A	W	T	R	D	E	M	A	G	Q	L	L	H	A	L	H	R	T
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	G	D	E	E	S	M	I	R	I	D	M	S	E	Y	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	H	S	T	S	L	T	E	K	V	R	R	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S		S							S		T	T	S	S														S		T	T							G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S												.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.																.	580	.	.	.	.	.	.	.	.	.	590	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.													.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	R	C	P	L	I	I	I	E	N	A	H	L	N	H	R	R	I	L	D	D	L	Q	R	A	I	S	L	I	P	.	.	.	.	.	.	.	D	G	Q	F	L	L	I	G	R	P	D	R	K	V	E	R	D	F	K	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	G	I	E	L	V	S	I	G	R
Query Conservation																																	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	K	P	Y	S	V	V	L	L	D	A	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	E	D	G	R	L	T	T	V	D	F	R	N	T	I	L	I	M	T	S	N	V	G	A	S	E	K	D	K	V	M	G	E	L	K	R	A	F	R	P	E	F	I	N	R	I	D	E	I	I	V	F	H	E
Template Known Secondary structure		.		S	S	S							G	G	G	S															S	B					B		T	T								S	S	S	T	T													S						T	T	S	S
Template Predicted Secondary structure		.
Template SS confidence
			609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		L	T	E	H	E	L	K	A	S	.	.	.	.	.	.	.	I	L	E	G	Q	N	I	D	Q	P	D	L	L	L	T	A	R	V	L	K	R	I	A	L	L	C	.	.	.	.	.	.	.	R	G	D	R	R	K	L	A	L	A	G	E	T	I	R
Query Conservation											.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Alig confidence			.	.							.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation			.	.
Template Sequence		K	.	.	K	H	L	T	E	I	V	S	L	M	S	D	Q	L	T	K	R	L	K	E	Q	D	L	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R	P	L	R	R	A	I	Q	K	H	V	E	D	R	L
Template Known Secondary structure			.	.																				T	T	T															G	G	G			T	T	T	T	T	T	T									T
Template Predicted Secondary structure			.	.
Template SS confidence
		716			.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions