Job Description P45756 Confidence 98.89% Date Thu Jan 5 12:03:32 GMT 2012 Rank 89 Aligned Residues 173 % Identity 19% Template c3pxgA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca121 and clpc1-485 complex Resolution 3.65 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	I	L	S	W	L	C	E	K	R	Q	T	W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	L	A	Q	Q	L	Q	K	D	K	H	R	R	V	I	T	L	S	L	V	V	S	W	Q	G	K	A	A	W	I	V	T	D	D	N	A	A	E	Q	G	C	R	D	S	A	W	T	R	D	E	M	A
Query Conservation
Alig confidence										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	V	I	E	V	L	S	.	.	R	R	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	A	E	G	L	A	Q	Q	I	I	N	N	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	I	L	R	D	K	R	V	M	T	L	E	D	R	L
Template Known Secondary structure										.	.		S	S	S							S		T	T	T	T	T													S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	S	S								T	T
Template Predicted Secondary structure										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		G	Q	L	L	H	A	L	H	R	T	D	S	R	C	P	L	I	I	I	E	N	A	H	L	N	H	R	R	I	L	D	D	L	Q	R	A	I	S	L	I	P	D	G	Q	F	L	L	I	G	R	P	D	R	K	.	.	.	.	V	E	R	D	F	K	K	Q	G	I	E	L	V	S	I	G	R	L	T	E	H	E
Query Conservation																																																								.	.	.	.
Alig confidence													.	.															.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation													.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	M	D	E	I	R	Q	A	G	.	.	N	I	I	L	F	I	D	A	K	P	S	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	Q	C	I	G	A	T	T	L	D	E	Y	R	K	Y	I	E	K	D	A	A	L	E	R	R	F	Q	P	I	Q	V	D	Q	P	S	V	D	E
Template Known Secondary structure										T			.	.												T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									T	T	T	T					T	T		S					S
Template Predicted Secondary structure													.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.														.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure															.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	A	S	I	L	E	G	Q	N	I	D	Q	.	.	P	D	L	L	L	T	A	R	V	L	K	R	I	A	L	L	C	R	G	D	.	.	.	.	.	.	.	.	.	.	R	R	K	L	A	L	A	G	E	T	I	R	L	L	Q	Q	A	E	Q	T	S	V
Query Conservation															.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	Q	I	L	Q	G	L	R	D	R	Y	E	A	H	H	R	V	S	I	T	D	D	A	I	E	A	A	V	K	L	S	D	R	Y	I	S	D	R	F	L	P	D	K	A	I	D	L	I	D	E	A	G	S	K	V	R	L	R	S	F	T	T	P	P	N	L
Template Known Secondary structure									T	T	T	T	S	G	G	G	S	S		S																S	S			S		T	T																		T	T	S			S	S	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions