Job Description P45756 Confidence 97.74% Date Thu Jan 5 12:03:32 GMT 2012 Rank 192 Aligned Residues 132 % Identity 16% Template c3llmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		M	S	T	R	R	E	V	I	L	S	W	L	C	E	K	R	Q	T	W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	.	.	.	.	.	L	A	Q	Q	L	Q	K	D	K	H	R	R	V	I	T	L	S	L	V	V	S	W	Q	G	K	A	A	W	I	V	T	D	D	N	A	A	E	Q	G	C	R
Query Conservation																																				.	.	.	.	.
Alig confidence																		.	.	.	.															.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		V	K	K	F	E	S	E	I	L	E	A	I	S	Q	N	S	.	.	.	.	V	V	I	I	R	G	A	T	G	C	G	K	T	T	Q	V	P	Q	F	I	L	D	D	F	I	Q	N	D	R	A	A	E	C	N	I	V	V	T	Q	P	R	R	I	S	A	V	S	V	A	E	R	V	A	F	E	R	G	E	E	P
Template Known Secondary structure		G	G	G	G												S	.	.	.	.								T	T	S	S																T	T		G	G	G								S	S														T	T	T			T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.					.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
																		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	A	W	T	R	D	E	M	A	G	Q	L	L	H	A	L	H	R	T	D	S	R	C	P	L	I	I	I	E	N	A	H	L	N	H	R	R	I	.	.	.	L	D	D	L	Q	R	A	I	S	L	I	P	D	G	Q	F	L	L	I	G	R	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template Conservation
Template Sequence		G	K	S	C	G	Y	S	V	R	F	E	S	I	L	P	R	P	H	A	S	I	X	F	C	T	V	G	V	L	L	R	K	L	E	A	G	I	R	G	I	S	H	V	I	V	D	E	I	H	E	R	D	I	N	T	D	F	L	L	V	V	L	R	D	V	V	Q	A	Y	P	E	V	R	I	V	L	X	S	A	T
Template Known Secondary structure		T	S	S						T	T							S	S	S																			T	T									T	T	S																				T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions