Job Description P45756 Confidence 97.70% Date Thu Jan 5 12:03:32 GMT 2012 Rank 206 Aligned Residues 98 % Identity 18% Template c3k8uA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative abc transporter, atp-binding protein PDBTitle: crystal structure of the peptidase domain of streptococcus2 coma, a bi-functional abc transporter involved in quorum3 sensing pathway Resolution 1.90 Å

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		294	.	.	.	.	.	300	.	.	.	.	.	.	.																.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																	.
Query Sequence		E	A	L	S	V	L	Y	G	V	W	G	Y	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	D	S	A	W	C	D	Q	A	V	R	A	G	L	A	C	K	S	G	N	A	S	L	Q	T	L	V	.	.	D	Q	N	L	P	W	I	A	S	L	K	V	G	D	K	K	.	L	P	V	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																	.
Template Conservation
Template Sequence		A	V	L	A	S	V	A	K	H	Y	G	S	N	Y	S	I	A	Y	L	R	E	L	S	K	T	N	K	Q	G	T	T	A	L	G	I	V	E	A	A	K	K	L	G	F	E	T	R	S	I	K	A	D	M	T	L	F	D	Y	N	D	L	T	Y	P	F	I	V	H	V	I	K	G	K	R	L	Q	H	Y	Y	V
Template Known Secondary structure											T	T												T	T		B	T	T	B													T	T										G	G	G	G	G		T	T			S									T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		V	V	R	V	G	E	A	S	V	D	V	L	V	G	.	.	.	Q	Q	T	W	T	L	T	H	K	W	F	E	S	V	W	T	G	D	Y	L	L	L
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		V	Y	G	S	Q	N	N	Q	L	I	I	G	D	P	D	P	S	V	K	V	T	R	M	S	K	E	R	F	Q	S	E	W	T	G	L	A	I	F	L
Template Known Secondary structure							T	T								S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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