Job Description P45756 Confidence 99.49% Date Thu Jan 5 12:03:32 GMT 2012 Rank 50 Aligned Residues 194 % Identity 16% Template c3hu2C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	L	A	Q	Q	L	Q	K	D	K	H	R	R	V	I	T	L	S	L	V	V	S	W	Q	G	K	A	A	W	I	V	T	D	D	N	A	A	E	Q	G	C	R	D	S	A	W	T	R	D	E	M	A	G	Q	L	L	H	A	L	H	R	T	D
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	T	G	A	F	F	F	L	I	.	.	.	.	.	.	.	.	N	G	P	E	I	M	.	.	.	.	.	.	.	.	.	.	S	K	L	A	G	E	S	E	S	N	L	R	K	A	F	E	E	A	E	K	N	A
Template Known Secondary structure												S	T	T	S	S													S	S						.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	T	S		T	T																S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.									270	.	.	.	.	.											.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.													.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																													.	.								.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																													.	.								.	.
Query Sequence		S	R	C	P	L	I	I	I	E	N	A	H	L	N	H	.	.	.	.	.	.	.	.	.	.	.	.	R	R	I	L	D	D	L	Q	R	A	I	S	L	I	P	D	G	Q	F	L	L	I	G	R	P	D	R	K	.	.	V	E	R	D	F	K	K	.	.	Q	G	I	E	L	V	S	I	G	R	L	T	E	H
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																													.	.								.	.
Alig confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.																													.	.								.	.
Template Conservation		.	.
Template Sequence		.	.	P	A	I	I	F	I	D	E	L	D	A	I	A	P	K	R	E	K	T	H	G	E	V	E	R	R	I	V	S	Q	L	L	T	L	M	D	G	L	K	Q	R	A	H	V	I	V	M	A	A	T	N	R	P	N	S	I	D	P	A	L	R	R	F	G	R	F	D	R	E	V	D	I	G	I	P	D	A	T
Template Known Secondary structure		.	.	S							S	G	G	G	T		B		S	S	S																				S		G	G	G									S		G	G	G	B		G	G	G	G	S	T	T	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																		.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	K	A	S	I	L	E	G	Q	N	I	D	Q	P	D	L	L	L	T	A	R	V	L	K	R	I	A	L	L	C	R	G	.	D	R	R	K	L	A	L	A	G	E	T	I	R	L	L	Q	Q	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	S	V	F	T	A	K	Q	W
Query Conservation																																			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.											.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		G	R	L	E	I	L	Q	I	H	T	K	N	M	K	L	A	D	D	V	D	.	.	.	L	E	Q	V	A	N	E	T	H	G	H	V	G	A	D	L	A	A	L	C	S	E	A	A	L	Q	A	I	R	K	K	M	D	L	I	D	L	E	D	E	T	I	D	A	E	V	M	N	S	L	A	V	T	M	D	D	F
Template Known Secondary structure											S	T	T	S		B		T	T			.	.	.									T	T																					T	T	T	S			T	T	S	S	S											B
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		223	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	I	Y	R	I	L	G	D	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	A	L	S	Q	S	N	P	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions