Job Description P45756 Confidence 99.52% Date Thu Jan 5 12:03:32 GMT 2012 Rank 46 Aligned Residues 187 % Identity 16% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	L	A	Q	Q	L	Q	K	D	K	H	R	R	V	I	T	L	S	L	V	V	S	W	Q	G	K	A	A	W	I	V	T	D	D	N	A	A	E	Q	G	C	R	D	S	A	W	T	R	D	E	M	A	G	Q	L	L	H	A	L	H	R	T	D	S	R
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	T	N	A	T	F	I	R	V	V	G	S	E	L	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P
Template Known Secondary structure			S						S	S	S	S	S	S												T	T								G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	T	T	T													T		S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.																				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		99	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query Sequence		C	P	L	I	I	I	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	L	N	H	R	R	I	L	D	D	L	Q	R	A	I	S	L	I	P	D	G	Q	F	L	L	I	G	R	P	D	R	K	V	E	R	D	F	K	K	Q	G	I	E	L	V	.	.	.	.	S	I	G	R	L	T	E	H
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Template Conservation
Template Sequence		S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	G	F	D	A	R	G	D	V	K	I	I	G	A	T	N	R	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K
Template Known Secondary structure									G	G	G	T	S	B			S	S	S				S	T														T	T	S	S		S	S	S	S								S	S	G	G	G	B						S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		E	L	K	A	S	I	L	E	G	Q	N	I	D	Q	P	D	L	L	L	T	A	R	V	L	K	R	I	A	L	L	C	R	G	.	D	R	R	K	L	A	L	A	G	E	T	I	R	L	L	Q	Q	A	E	Q	T	S	V	F	T	A	K	Q	W	R	M	I	Y	R
Query Conservation																																			.
Alig confidence												.	.	.																					.
Template Conservation												.	.	.
Template Sequence		G	R	L	E	I	L	K	I	H	T	.	.	.	R	K	M	N	L	A	E	D	V	N	L	E	E	I	A	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E
Template Known Secondary structure										T	T	.	.	.	T	T	S		B		S	S								T	T	S	T	T																				T	T		S	S	B
Template Predicted Secondary structure												.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions