Job Description P45756 Confidence 98.38% Date Thu Jan 5 12:03:32 GMT 2012 Rank 113 Aligned Residues 121 % Identity 14% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		L	C	E	K	R	Q	T	W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	L	A	Q	Q	L	Q	K	D	K	H	R	R	V	I	T	L	S	L	V	V	S	W	Q	G	K	A	A	W	I	.	.	.	.	.	V	T	D	D	N	A	A	E	Q	G	C	R	D	S	A	W	T	R	D	E	M	A	G
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.
Template Conservation
Template Sequence		E	I	R	K	A	E	K	P	Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y
Template Known Secondary structure					T	S		S										T	T	S	S															T	T										T	T															T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		Q	L	L	H	A	L	H	R	T	D	S	R	C	P	L	I	I	I	E	N	A	H	.	.	L	N	H	R	R	I	L	D	D	L	Q	R	A	I	S	L	I	P	D	G	Q	F	L	L	I	G
Query Conservation																								.	.
Alig confidence												.	.											.	.
Template Conservation												.	.
Template Sequence		D	A	I	Q	H	A	K	A	R	G	.	.	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G
Template Known Secondary structure											T	.	.		S								S	S			S	S	S																S
Template Predicted Secondary structure												.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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