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Job DescriptionP45756
Confidence99.41%DateThu Jan 5 12:03:32 GMT 2012
Rank58Aligned Residues166
% Identity15%Templatec2zamA_
PDB info PDB header:protein transportChain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b; PDBTitle: crystal structure of mouse skd1/vps4b apo-form
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  WRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSR
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Template Sequence  WRGILLFGPPGTGKSYLAKAVATEANNST. FFSISSSDLVSSEKLVKNLF. . . . . . . . . . . . . . . . . . . . . . QLARENKP
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Query Sequence  CPLIIIENAHLNH. . . . . RRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLTEHELKASILEGQNID
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Template Sequence  SIIFIDEIDSSEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHL. . G
Template Known Secondary structure  S






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Query Sequence  QPDLLLTARVLKRIALLCRGDRRK. LALAGETIRLLQ
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Template Sequence  STQNSLTEADFQELGRKTDGYSGADISIIVRDALMQP
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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