Job Description P45756 Confidence 97.23% Date Thu Jan 5 12:03:32 GMT 2012 Rank 348 Aligned Residues 119 % Identity 18% Template c2w6jD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp synthase subunit beta, mitochondrial; PDBTitle: low resolution structures of bovine mitochondrial f1-atpase2 during controlled dehydration: hydration state 5. Resolution 3.84 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																						.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	S	W	L	C	E	K	R	Q	T	W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	L	A	Q	Q	L	Q	K	D	K	.	.	.	H	R	R	V	I	T	L	S	L	V	V	S	W	Q	G	K	A	A	W	I	V	T	D	D	N	A	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																					.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		V	V	D	L	L	A	P	Y	A	K	G	G	K	I	G	.	L	F	G	G	A	G	V	G	K	T	V	L	I	M	E	L	I	N	N	V	A	K	A	H	G	G	Y	S	V	F	A	G	V	G	E	R	T	R	E	G	N	D	L	Y	H	E	M	I	E	S	G	V	I	N	L	K	D	A	T	S	K	V	A	L
Template Known Secondary structure							S				T	T					.					T	T	S	S												T	T	T	T		S	S								S																	T	S	S		S	S	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
							73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																							.		.
Query SS confidence		.	.	.	.	.																							.		.
Query Sequence		.	.	.	.	.	G	C	R	D	S	A	W	T	R	D	E	M	A	G	Q	L	L	H	A	L	H	R	.	T	.	D	S	R	C	P	L	I	I	I	E	N	A	H	L	N	H	R	R	I	L	D	D	L	Q	R	A	I	S	L	I	P	D	G	Q
Query Conservation		.	.	.	.	.																							.		.
Alig confidence		.	.	.	.	.																							.		.															.	.
Template Conservation																																														.	.
Template Sequence		V	Y	G	Q	M	N	E	P	P	G	A	R	A	R	V	A	L	T	G	L	T	V	A	E	Y	F	R	D	Q	E	G	Q	D	V	L	L	F	I	D	N	I	F	R	F	.	.	T	Q	A	G	S	E	V	S	A	L	L	G	R	I	P	S	A	V
Template Known Secondary structure						T	T	S																						T	T		S									T				.	.									G	G	G	T					G	G
Template Predicted Secondary structure																																														.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions