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Job Description | P45756 | Confidence | 97.43% | Date | Thu Jan 5 12:03:32 GMT 2012 |
Rank | 277 | Aligned Residues | 120 |
% Identity | 12% | Template | c2vbcA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; |
PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus
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Resolution | 3.15 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
Q | T | W | R | L | C | Y | L | L | G | E | A | G | S | G | K | T | W | . |
L | A | Q | Q | L | Q | K | D | K | H | R | R | V | I | T | L | S | L | V | V | S | W | Q | G | K | A | A | W | I | V | T | D | D | . |
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N | A | A | E | Q | G | C | R | D | S | A | W | T | R | D | E | M |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | K | K | R | L | T | I | M | D | L | H | P | G | A | G | K | T | K | R | I | L | P | S | I | V | R | E | A | L | K | R | R | L | R | T | L | I | L | A | P | T | R | V | V | A | A | E | M | E | E | A | L | R | G | L | P | I | R | Y | Q | T | P | A | V | K | S | D | H | T | G | R | E | I | V | D | L | M | C | H | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
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85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | G | Q | L | L | H | A | L | H | R | T | D | S | R | C | P | L | I | I | I | E | N | A | H | L | N | H | R | R | I | L | D | D | L | Q | R | A | I | S | L | I | . |
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P | D | G | Q | F | L | L | I | G | R | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | F | T | T | R | L | L | S | S | T | R | V | P | N | Y | N | L | I | V | M | D | E | A | H | F | T | D | P | C | S | V | A | A | R | G | Y | I | S | T | R | V | E | M | G | E | A | A | A | I | F | M | T | A | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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