|   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
C | Y | L | L | G | E | A | G | S | G | K | T | W | L | A | Q | Q | L | Q | K | D | K | H | R | R | V | I | . |
. |
. |
T | L | S | L | V | V | S | W | Q | G | K | A | A | W | I | V | T | D | D | N | A | A | E | Q | G | C | R | D | S | A | W | T | R | D | E | M | A | G | Q | L | L | H | A | L | H | R | T | . |
. |
. |
Query Conservation |   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |
|
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|
Template Sequence |   |
L | L | V | A | G | T | T | G | S | G | K | S | V | G | V | N | A | M | L | L | S | I | L | F | K | S | T | P | S | E | A | R | L | I | M | I | D | P | K | M | L | E | L | S | I | Y | E | G | I | P | H | L | L | C | P | V | V | T | D | M | K | E | A | A | N | A | L | R | W | S | V | A | E | M | E | R | R | Y | R | L |
Template Known Secondary structure |   |
 |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | T |  |  |  |  |  |  |
| S | S | S |  |  |  |  | T | T | T | T |
| T | T | B | S | S | S |
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
462 | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | S | R | C | P | L | I | I | I | E | N | A | H | L | N | . |
. |
. |
. |
H | R | R | I | L | D | D | L | Q | R | A | I | S | L | I | P | D |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
|
|
|
|
|
|
|   |   |
| . | . | . | . |   |   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|
Template Sequence |   |
M | A | A | M | G | V | R | N | L | A | G | F | N | R | K | V | K | D | A | E | E | A | G | T | P | L | T | D | P | L | F | R | R | E | S | P | D | D | E | P | P | Q | L | S | T | L | P | T | I | V | V | V | V | D | E | F | A | D | M | M | M | I | V | G | K | K | V | E | E | L | I | A | R | I | A | Q | K | A | R | A |
Template Known Secondary structure |   |
 |  |  |  | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| B |
| T | T |
|
|
|
| S | T | T |
|
|
|
| B |
|
|
|
|
|  |  |  |  |  |  | S |
|
| T | T |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
542 | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . |
  |
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | |
|
|
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | F | L | L | I | G | R | P | D | R | K | . |
. |
. |
. |
V | E | R | D | F | K | K | Q | G | I | E | L | V | S | I | G | R | L | T | E | H | E | L | K | A | S | I |
Query Conservation |   |
  |   |
|
|
|
|
|   |   |
|   |   | . | . | . | . |
|   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |
|
|   |
|
|
|   |
|   |   |
|
|   |   |
|
|
Template Sequence |   |
A | G | I | H | L | I | L | A | T | Q | R | P | S | V | D | V | I | T | G | L | I | K | A | N | I | P | T | R | I | A | F | Q | V | S | S | K | I | D | S | R | T | I | L |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  | S |
|
|
| T | T | T | S |
|  |  |  |  |  | T |
|
|  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
622 | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . |
  |