Job Description P45756 Confidence 99.00% Date Thu Jan 5 12:03:32 GMT 2012 Rank 86 Aligned Residues 179 % Identity 15% Template c2hcbC_ PDB info PDB header:replication Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus Resolution 3.51 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	I	L	S	W	L	C	E	K	R	Q	T	W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	L	A	Q	Q	L	Q	K	D	K	H	R	R	V	I	T	L	S	L	V	V	S	W	Q	G	K	A	A	W	I	V	T	D	D	N	A	A	E	Q	G	C	R	D	S	A	W	T	R	D	E	M	A
Query Conservation
Alig confidence																																																		.	.	.	.	.																											.
Template Conservation																																																		.	.	.	.	.																											.
Template Sequence		E	V	V	K	E	A	L	E	N	L	G	S	L	Y	N	P	I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	R	G	Y	R	V	I	Y	S	.	.	.	.	.	S	A	D	D	F	A	Q	A	M	V	E	H	L	K	K	G	T	I	N	E	F	R	N	M	Y	K	.
Template Known Secondary structure							T	T	T	T	T	T	T	S									S	S	S	S	S															T	T							.	.	.	.	.																T											.
Template Predicted Secondary structure																																																		.	.	.	.	.																											.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																											.	.	.	.	.	.
Query SS confidence																											.	.	.																											.	.	.	.	.	.
Query Sequence		G	Q	L	L	H	A	L	H	R	T	D	S	R	C	P	L	I	I	I	E	N	A	H	L	N	.	.	.	H	R	R	I	L	D	D	L	Q	R	A	I	S	L	I	P	D	G	Q	F	L	L	I	G	R	P	.	.	.	.	.	.	D	R	K	V	E	R	D	F	K	K	Q	G	I	E	L	V	S	I	G	R
Query Conservation																											.	.	.																											.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																											.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	L	L	L	L	D	D	V	Q	F	L	S	G	K	E	R	T	Q	I	E	F	F	H	I	F	N	T	L	Y	L	L	E	K	Q	I	I	L	A	S	D	R	H	P	Q	K	L	D	G	V	S	D	R	L	V	S	R	F	E	G	G	I	L	V	E	I	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T		S							G	G	G	G	T	T		S																T	T								S	S		G	G	G		T	T	S											S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	H	E	L	K	A	S	I	L	E	G	Q	N	I	D	Q	P	D	L	L	L	T	A	R	V	L	K	R	I	A	L	L	C	R	G	D	R	R	K	L	A	L	A	G	E	T	I
Query Conservation
Alig confidence																						.	.														.
Template Conservation																						.	.														.
Template Sequence		L	D	N	K	T	R	F	K	I	I	K	E	K	L	K	E	F	N	L	E	.	.	L	R	K	E	V	I	D	Y	L	L	E	N	T	.	K	N	V	R	E	I	E	G	K	I	K	L	I
Template Known Secondary structure				S														T	T			.	.														.		S
Template Predicted Secondary structure																						.	.														.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions