Job Description P45756 Confidence 97.53% Date Thu Jan 5 12:03:32 GMT 2012 Rank 250 Aligned Residues 118 % Identity 11% Template c2d62A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein Resolution 2.10 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	W	R	L	C	Y	L	L	G	E	A	G	S	G	K	T	W	L	A	Q	Q	L	Q	K	D	K	H	R	R	V	I	T	L	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	S	W	Q	G	K	A	A	W	I	V	T	D	D	N
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	X	I	A	G	L	E	E	P	T	R	G	Q	I	Y	I	E	D	N	L	V	A	D	P	E	K	G	V	F	V	P	P	K	E	R	D	V	A	X	V	F	Q	S	Y	A	L	Y	P	H	X	T	V	Y	D	N	I	A	F	P	L
Template Known Secondary structure			T	T								S	T	T	S	S										T	S	S			S							T	T						G	G	G	T									T							S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		A	A	E	Q	G	C	R	D	S	A	W	T	R	D	E	M	A	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	H	A	L	H	R	T	D	S	R	C	P	L	I	I	I	E	N	A	H	L	N	H	.	.	.	.	R	R	I	L	D	D	L	Q	R	A	I
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		K	L	R	K	V	P	K	Q	E	I	D	K	R	V	R	E	V	A	E	X	L	G	L	T	E	L	L	N	R	K	P	R	E	L	S	G	G	Q	R	Q	R	V	A	L	G	R	A	I	I	R	R	P	K	V	F	L	X	D	E	P	L	S	N	L	D	A	K	L	R	V	K	X	R	A	E	L	K	K	L	Q
Template Known Secondary structure			T	T	T																	T	T		G	G	G	T	T			G	G	G	S															S	S			S						S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	P	D	G	Q	F	L	L	I	G	R
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		R	Q	.	L	G	V	T	T	I	Y	V	T	H
Template Known Secondary structure				.		T								S
Template Predicted Secondary structure				.
Template SS confidence
		190	.		.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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