 |
Job Description | P45756 | Confidence | 97.72% | Date | Thu Jan 5 12:03:32 GMT 2012 |
Rank | 202 | Aligned Residues | 79 |
% Identity | 13% | Template | c1xnjB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate |
PDBTitle: aps complex of human paps synthetase 1
|
Resolution | 1.98 Å |
|
 |
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | R | L | C | Y | L | L | G | E | A | G | S | G | K | T | W | L | A | Q | Q | L | Q | K | D | K | H | R | R | V | I | T | L | S | L | V | V | S | W | Q | G | K | A | A | W | I | V | T | D | D | N | A | A | E | Q | G | C | R | D | S | A | W | T | R | D | E | M | A | G | Q | L | L | H | A | L | H | R | T | D | S | R |
Query Conservation |   |
  |
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|   |   | . | . | . | . | . |
|   |   |
|
|
|
|
|   |   |
|
|   |
|   |   |
|
|   |   |   |
|
|   |
|
|   |   |   |
| . | . |
Template Sequence |   |
G | C | T | V | W | L | T | G | L | S | G | A | G | K | T | T | V | S | M | A | L | E | E | Y | L | V | C | H | G | I | P | C | Y | T | L | D | G | D | N | I | R | Q | G | . |
. |
. |
. |
. |
L | N | K | N | L | G | F | S | P | E | D | R | E | E | N | V | R | R | I | A | E | V | A | K | L | F | A | D | A | G | . |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| T | T | T |
|
|
|
| . | . | . | . | . |
| T | T | T |
|
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
|
  |
  |   |
99 | 100 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
C | P | L | I | I | I |
Query Conservation |   |
  |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
Template Sequence |   |
L | V | C | I | T | S |
Template Known Secondary structure |   |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|