 |
Job Description | P45756 | Confidence | 97.23% | Date | Thu Jan 5 12:03:32 GMT 2012 |
Rank | 349 | Aligned Residues | 96 |
% Identity | 16% | Template | c1vdzA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:a-type atpase subunit a; |
PDBTitle: crystal structure of a-type atpase catalytic subunit a from2 pyrococcus horikoshii ot3
|
Resolution | 2.55 Å |
|
 |
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
L | S | W | L | C | E | K | R | Q | T | W | R | L | C | Y | L | L | G | E | A | G | S | G | K | T | W | L | A | Q | Q | L | Q | K | D | K | H | R | R | V | I | T | L | S | L | V | V | S | W | Q | G | K | A | A | W | I | V | T | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | N | A | A |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|
|
|
|
|
|   |   | . |
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
Template Sequence |   |
I | D | T | F | F | P | Q | A | K | G | G | T | A | A | . |
I | P | G | P | F | G | S | G | K | T | V | T | Q | H | Q | L | A | K | W | S | D | A | Q | V | V | I | Y | I | G | C | G | E | R | G | N | E | M | T | D | V | L | E | E | F | P | K | L | K | D | P | K | T | G | K | P | L | M | E | R | T | V | L | I | A | N |
Template Known Secondary structure |   |
 |  |  |  | S |
|
| B | T | T |
|  |  |  | . |  |  | S |
| T | T |
| T | T |
|
|  |  |  |  |  |  |  |  | S | S |
| S |  |  |  |  |  |
|
| S |
|
| T | T | T | T |  |  |  |  | S | S | G | G | G |
| B |
| T | T | T | S | S | B | G | G | G | G |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
  |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | G | C | R | D | S | A | W | T | R | D | E | M | A | G | Q | L | L | H | A | L | H | R | T | D | S | R | C | P | L | I | I | I | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|   |
|
Template Sequence |   |
T | S | N | M | P | V | A | A | R | E | A | S | I | Y | T | G | I | T | I | A | E | Y | F | R | D | M | G | Y | D | V | A | L | M | A | D |
Template Known Secondary structure |   |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
297 | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|