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Job DescriptionP45756
Confidence99.69%DateThu Jan 5 12:03:32 GMT 2012
Rank17Aligned Residues199
% Identity18%Templatec1hqcB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:ruvb; PDBTitle: structure of ruvb from thermus thermophilus hb8
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  TRREVILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRD
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Template Sequence  QKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEK. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS
S






TT

T


TTT

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   22.......30.........40.........50.........60.........70......
 
   83......90.........100.........110.........120.... .....130.........140...
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Query Sequence  EMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISL. . . . . . . . . . . . . . . . . . . IPDGQFLLIGRPDRKVERD
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Template Sequence  . . PGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAP
Template Known Secondary structure  ..TT

TT
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S

BSSSSS
B





SS
SS
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S
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   77..80.........90.........100.........110.........120.........130.........140.........150....
 
   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  FKKQGIELVSIGRLTEHELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWR
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Template Sequence  LLSRFGIVEHLEYYTPEELAQGVMRDA. . RLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERAL
Template Known Secondary structure  TTTT
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..TTS

B
S
S
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   155....160.........170.........180. ........190.........200.........210.........220.........230..
 
   224.....230
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Query Sequence  MIYRILG
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Template Conservation         
Template Sequence  EALAALG
Template Known Secondary structure  T
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   233......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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