Job Description P32057 Confidence 99.86% Date Thu Jan 5 11:49:04 GMT 2012 Rank 26 Aligned Residues 351 % Identity 11% Template d1v4va_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDP-N-acetylglucosamine 2-epimerase Resolution 1.80

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.									.
Query SS confidence																								.	.									.
Query Sequence		K	I	L	V	Y	G	I	N	Y	S	P	E	L	T	G	I	G	K	Y	T	G	E	.	.	M	V	E	W	L	A	A	Q	.	G	H	E	V	R	V	I	T	A	P	P	Y	Y	P	Q	W	Q	V	G	E	N	Y	S	A	W	R	Y	K	R	E	E	G	A	A	T	V	W	R	C	P	L	Y	V	P	K	Q	P
Query Conservation																								.	.									.
Alig confidence								.	.	.	.	.	.	.										.	.									.														.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Sequence		R	V	V	L	A	F	.	.	.	.	.	.	.	G	T	R	P	E	A	T	K	X	A	P	V	Y	L	A	L	R	G	I	P	G	L	K	P	L	V	L	L	T	G	Q	H	R	.	.	.	.	.	.	.	.	.	E	Q	L	R	Q	A	L	S	L	F	G	I	Q	E	D	R	N	L	D	V	X	Q	E	R	Q
Template Known Secondary structure								.	.	.	.	.	.	.		S																T	S	T	T									S	S			.	.	.	.	.	.	.	.	.									T	T	T				S							S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.								.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	L	K	R	L	L	H	L	G	S	F	A	V	S	S	F	F	P	L	M	A	Q	R	R	W	K	P	D	R	I	I	G	V	V	P	T	L	F	C	A	P	G	M	R	L	L	A	K	L	S	G	A	R	T	V	L	H	I	Q	D	Y	E	V	D	A	M	L	G	L	G	L	A	G	K	G	K	G	G	K
Query Conservation
Alig confidence											.	.	.	.	.	.																									.																																.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.																									.																																.	.	.	.	.	.	.	.	.
Template Sequence		A	L	P	D	L	A	A	R	I	.	.	.	.	.	.	L	P	Q	A	A	R	A	L	K	E	X	G	A	D	Y	V	L	V	H	G	D	T	L	T	.	T	F	A	V	A	W	A	A	F	L	E	G	I	P	V	G	H	V	E	A	G	L	R	S	G	N	L	K	E	P	F	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	.	.	.	.	.											T	T		S						S	S				.											T	T							T						S		T	T	S	S	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.																									.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	L	A	T	A	F	E	R	S	G	L	H	N	V	D	N	V	S	T	I	S	R	S	M	M	N	K	A	I	E	K	G	V	A	A	E	N	V	I	F	F	P	N	W	S	E	I	A	R	F	Q	H	V	A	D	A	D	V	D	A	L	R	N	Q	L	D	L	P	D	N	K	K	I	I	L	Y	S	G
Query Conservation
Alig confidence		.	.	.																																																				.	.	.	.	.
Template Conservation		.	.	.																																																				.	.	.	.	.
Template Sequence		.	.	.	P	E	E	A	N	R	R	L	T	D	V	L	T	D	L	D	F	A	P	T	P	L	A	K	A	N	L	L	K	E	G	K	R	E	E	G	I	L	V	T	G	Q	T	G	V	D	A	V	L	L	A	.	.	.	.	.	A	K	L	G	R	L	P	E	G	L	P	E	G	P	Y	V	T	V	T	X	H
Template Known Secondary structure		.	.	.	T													S					S	S									T	T	T			G	G	G																.	.	.	.	.								T	T			S	S
Template Predicted Secondary structure		.	.	.																																																				.	.	.	.	.
Template SS confidence
					135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	G	E	K	Q	G	L	E	N	V	I	E	A	A	D	R	L	R	D	E	P	L	I	F	A	I	V	G	Q	G	G	G	K	A	R	L	E	K	M	A	Q	Q	R	G	L	R	N	M	Q	F	F	P	L	Q	S	Y	D	A	L	P	A	L	L	K	M	G	D	C	H	L	V	V	Q	K	R	G	A	A	D
Query Conservation
Alig confidence																																																															.	.																.	.
Template Conservation																																																															.	.																.	.
Template Sequence		R	R	E	N	W	P	L	L	S	D	L	A	Q	A	L	K	R	V	A	E	A	F	P	H	L	T	F	V	Y	P	V	H	L	N	P	V	V	R	E	A	V	F	P	V	L	K	G	V	R	N	F	V	L	L	D	P	L	E	Y	G	S	.	.	X	A	A	L	X	R	A	S	L	L	L	V	T	D	S	.	.
Template Known Secondary structure			G	G	G	G	G	G																T	T	S								S													T	T		T	T												.	.							T							S		.	.
Template Predicted Secondary structure																																																															.	.																.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	V	L	P	S	K	L	T	N	I	L	A	V	G	G	N	A	V	I	T	.	A	E	A	Y	T	E	L	G	Q	L	C	E	T	F	P	G	I	A	V	C	V	E	P	E	S	V	E	A	L	V	A	G	I	R	Q	A	L	L	L	P	K	H	N	T	V	A	R	E	Y	A	E	R	T	L	D	K	E	N	V
Query Conservation																						.
Alig confidence		.	.	.																		.							.	.	.							.								.																											.
Template Conservation		.	.	.																									.	.	.							.								.																											.
Template Sequence		.	.	.	G	G	L	Q	E	E	G	A	A	L	G	V	P	V	V	V	L	R	N	V	T	E	R	P	.	.	.	E	G	L	K	A	G	.	I	L	K	L	A	G	T	.	D	P	E	G	V	Y	R	V	V	K	G	L	L	E	N	P	E	E	L	S	R	X	R	K	A	K	.	N	P	Y	G	D	G	K	A
Template Known Secondary structure		.	.	.										T	T							S	S	S		S			.	.	.						T	.	S						S	.														T											S		.		S	S			S
Template Predicted Secondary structure		.	.	.																									.	.	.							.								.																											.
Template SS confidence
					283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.		.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.
		398	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	F	I	N	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	X	V	A	R	G	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions