Job Description P32057 Confidence 99.56% Date Thu Jan 5 11:49:04 GMT 2012 Rank 39 Aligned Residues 370 % Identity 11% Template d1pn3a_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		M	K	I	L	V	Y	G	I	N	Y	S	P	E	L	T	G	I	G	K	Y	T	G	E	M	V	E	W	L	A	A	Q	G	H	E	V	R	V	I	T	A	P	P	Y	Y	P	Q	W	Q	V	G	E	N	Y	S	A	W	R	Y	K	R	E	E	G	A	A	T	V	W	R	C	P	.	.	.	.	L	Y	V	P	K
Query Conservation																																																																									.	.	.	.
Alig confidence										.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation										.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	V	L	I	T	G	C	.	.	.	.	G	S	R	G	D	T	E	P	L	V	A	L	A	A	R	L	R	E	L	G	A	D	A	R	M	C	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	Y	V	E	R	C	A	E	V	G	V	P	M	V	P	V	G	R	A	V	R	A	G	A	R	E
Template Known Secondary structure										.	.	.	.	S	S																	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G								T							S	S		S	S	G	G	G	S
Template Predicted Secondary structure										.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.					.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.														.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	S	T	L	K	R	L	L	H	L	G	S	F	A	V	S	S	F	F	P	L	M	A	Q	R	R	W	K	P	D	R	I	I	G	V	V	P	T	L	F	C	A	P	G	M	R	L	L	A	K	L	S	G	A	R	T	V	L	H	I	Q	D	Y	E	V	D	A	M	L	G	L	G	L	A	G	K	G	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	E	L	P	P	G	A	A	E	V	V	T	E	V	V	A	E	W	F	D	K	V	P	A	A	I	E	G	C	D	A	V	V	T	T	G	L	L	P	A	A	V	A	V	R	S	M	A	E	K	L	G	I	P	Y	R	Y	T	V	L	S	P	D	H	L	P	S	E	Q	S	Q	A	E	R	D	M	Y	N	Q
Template Known Secondary structure		T	T				T	T		G	G	G																	T	T		S																						T								S	S	G	G	G	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		G	K	V	A	Q	L	A	T	A	F	E	R	S	G	L	H	N	.	.	.	.	V	D	N	V	S	T	I	S	R	S	M	M	N	K	A	I	E	K	G	V	A	A	E	N	V	I	F	F	P	N	W	S	E	I	A	R	F	Q	H	V	A	D	A	D	V	D	A	L	R	N	Q	L	D	L	P	D	N	K	K
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.
Template Conservation
Template Sequence		G	A	D	R	L	F	G	D	A	V	N	S	H	R	A	S	I	G	L	P	P	V	E	H	L	Y	D	Y	G	Y	T	D	Q	P	W	L	A	A	D	P	V	L	S	P	L	R	P	T	D	L	G	T	V	Q	T	G	A	W	I	L	P	D	E	R	P	L	S	A	E	L	E	A	F	L	A	A	G	S	T	P
Template Known Secondary structure							T										T	T	S														S	S					S		T	T	T	S				T	T			S			B																				T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	L	Y	S	G	N	I	G	E	K	Q	G	L	E	N	V	I	E	A	A	D	R	L	R	D	E	P	L	I	F	A	I	V	G	Q	G	G	G	K	A	R	L	E	K	M	A	Q	Q	R	G	L	R	N	M	Q	F	F	P	L	Q	S	Y	D	A	L	P	A	L	L	K	M	G	D	C	H	L	V	V	Q
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		V	Y	V	G	F	G	S	S	S	R	P	A	T	A	D	A	A	K	M	A	I	K	A	V	R	A	S	G	R	R	I	V	L	S	R	G	W	A	D	L	V	L	P	D	.	.	.	.	.	.	.	.	.	D	G	A	D	C	F	V	V	G	E	V	N	L	Q	E	L	F	G	R	V	A	A	A	I	.	.	.
Template Known Secondary structure							T	T			S	T																T	T								T	T	T	T				S	S	.	.	.	.	.	.	.	.	.			T	T					S	S								T	T	S	S				.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.										.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.						.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.																						.	.
Query SS confidence																																.	.	.	.	.																						.	.
Query Sequence		K	R	G	A	A	D	A	V	L	P	S	K	L	T	N	I	L	A	V	G	G	N	A	V	I	T	A	E	A	Y	.	.	.	.	.	T	E	L	G	Q	L	C	E	T	F	P	G	I	A	V	C	V	E	P	E	S	.	.	V	E	A	L	V	A	G	I	R	Q	A	L	L	L	P	K	H	N	T	V	A	R
Query Conservation																																.	.	.	.	.																						.	.
Alig confidence		.	.	.	.	.																										.	.	.	.	.																						.	.													.
Template Conservation		.	.	.	.	.																																																																		.
Template Sequence		.	.	.	.	.	H	H	D	S	A	G	T	T	L	L	A	M	R	A	G	I	P	Q	I	V	V	R	R	V	V	D	N	V	V	E	Q	A	Y	H	A	D	R	V	A	E	L	G	V	G	V	A	V	D	G	P	V	P	T	I	D	S	L	S	A	A	L	D	T	A	L	.	A	P	E	I	R	A	R	A	T
Template Known Secondary structure		.	.	.	.	.			S												T								S	S			B	T	T	B												T	S							S	S														T	.	S	T	T
Template Predicted Secondary structure		.	.	.	.	.																																																																		.
Template SS confidence
							292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.
		386	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		E	Y	A	E	R	.	.	T	L	D	K	E	N	V	L	R	Q	F	I	N	D	I
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		T	V	A	D	T	I	R	A	D	G	T	T	V	A	A	Q	L	L	F	D	A	V
Template Known Secondary structure				G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions