Job Description P32057 Confidence 42.77% Date Thu Jan 5 11:49:04 GMT 2012 Rank 356 Aligned Residues 68 % Identity 13% Template c4a18J_ PDB info PDB header:ribosome Chain: J: PDB Molecule:translation initiation factor eif-6, putative family PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of molecule 1 Resolution 3.52 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Q	K	R	G	A	A	D	A	V	L	P	S	K	L	T	N	I	L	A	V	G	G	N	A	V	I	T	A	E	A	Y	T	E	L	G	Q	L	C	E	T	F	P	G	I	A	V	C	V	E	P	E	S	V	E	A	L	V	A	G	I	R	Q	A	L	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	C	L	V	S	V	G	A	S	E	N	F	Y	S	V	F	E	S	E	L	V	P	H	I	P	V	I	H	T	S	I	G	G	T	R	I	V	G	R	V	T	C	G	N	K	N	G	L	L	V	P	N	T	C	N	D	N	E	L	R	N	I	R	N	S	L	P	D
Template Known Secondary structure							T	T														T	T	T	S							S	S	S		S										T	T						T	T													S		T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions