Job Description P32057 Confidence 100.00% Date Thu Jan 5 11:49:04 GMT 2012 Rank 3 Aligned Residues 398 % Identity 12% Template c3s29C_ PDB info PDB header:transferase Chain: C: PDB Molecule:sucrose synthase 1; PDBTitle: the crystal structure of sucrose synthase-1 from arabidopsis thaliana2 and its functional implications. Resolution 2.85 Å

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		2	.	.	.	.	.	.	.	10										.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30													.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	L	V	Y	G	I	N	Y	.	.	.	.	.	.	.	.	.	S	P	E	L	T	G	I	G	K	Y	T	G	E	M	V	E	W	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	H	E	V	R	V	I	T	A	P	P	Y	Y	P	Q	W	Q	V	G	E	N	Y	S	A	W	R	Y	K	R
Query Conservation											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																																.	.
Template Sequence		N	V	V	I	L	S	P	H	G	Y	F	A	Q	D	N	V	L	G	Y	P	D	T	G	G	Q	V	V	Y	I	L	D	Q	V	R	A	L	E	I	E	M	L	Q	R	I	K	Q	Q	G	L	N	I	K	P	R	I	L	I	L	T	R	L	L	.	.	P	D	A	V	G	T	T	C	G	E	R	L	E	R	V	Y
Template Known Secondary structure									S	S				S	S	S		T	T	S	T	T		S																								T	T															.	.	T	T			S	S	S	T	T	S	S					T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		E	E	G	A	A	T	V	W	R	C	P	L	Y	V	.	.	.	.	.	P	K	Q	P	S	T	L	K	R	L	L	H	L	G	S	F	A	V	S	S	F	F	P	L	M	A	Q	R	R	W	K	P	D	R	I	I	G	V	V	P	T	L	F	C	A	P	G	M	R	L	L	A	K	L	S	G	A	R	T	V	L
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																																								.	.
Template Conservation																																																												.	.
Template Sequence		D	S	E	Y	C	D	I	L	R	V	P	F	R	T	E	K	G	I	V	R	K	W	I	S	R	F	E	V	W	P	Y	L	E	T	Y	T	E	D	A	A	V	E	L	S	K	E	L	N	G	K	P	D	L	I	I	G	N	Y	.	.	S	D	G	N	L	V	A	S	L	L	A	H	K	L	G	V	T	Q	C	T
Template Known Secondary structure		T		S	S											T	T					S				G	G	G		G	G	G																	S	S			S							.	.															T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																							.	.	.	.	.	190	.	.
Predicted Secondary structure																.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	Q	D	Y	E	V	D	A	M	L	G	L	G	.	L	A	G	K	G	K	G	G	K	V	A	Q	L	A	T	A	F	E	R	S	G	L	H	N	V	D	N	V	S	T	I	S	R	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	N	K	A	I	E	K	G
Query Conservation																.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	H	A	L	E	K	T	K	Y	P	D	S	D	I	Y	W	K	K	L	D	D	K	Y	H	F	S	C	Q	F	T	A	D	I	F	A	M	N	H	T	D	F	I	I	T	S	T	F	Q	E	I	A	G	S	K	E	T	V	G	Q	Y	E	S	H	T	A	F	T	L	P	G	L	Y	R	V	V	H	G	I	D
Template Known Secondary structure				S							S	T	T	T	T	T	T																								S	S					S		S							S	S	S			T	T	G	G	G	S	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	A	E	N	V	I	F	F	P	N	W	S	E	I	A	R	F	Q	H	V	A	D	A	D	V	D	A	L	R	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	L	P	D	N	K	K	I	I	L	Y	S	G	N	I	G	E	K	Q	G	L	E	N	V	I	E	A	A	D
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	D	P	K	F	N	I	V	S	P	G	A	D	M	S	I	Y	F	P	Y	T	E	E	K	R	R	L	T	K	F	H	S	E	I	E	E	L	L	Y	S	D	V	E	N	K	E	H	L	C	V	L	K	D	K	K	K	P	I	L	F	T	M	A	R	L	D	R	V	K	N	L	S	G	L	V	E	W	Y	G
Template Known Secondary structure		T	T		T	T										T	T	T				T	T		T	T	T	S		G	G	G											S			S	S	S			S		B	S		T	T	S										S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.																.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	R	D	E	P	L	I	F	A	I	V	G	Q	G	G	G	K	A	R	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	Q	Q	R	G	L	R	N	M	Q	F	F	P	L	Q	S	Y	D	A	L	P	A	L	L	K	M	G	D	C	H	L	V	V	Q	K	R	G	A	A	D	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	T	R	L	R	E	L	A	N	L	V	V	V	G	G	D	R	R	K	E	S	K	D	N	E	E	K	A	E	M	K	K	M	Y	D	L	I	E	E	Y	K	L	N	G	Q	F	R	W	I	S	S	Q	M	D	R	V	R	N	G	E	L	Y	R	Y	I	C	D	T	K	G	A	F	V	Q	P	A	L	Y	E
Template Known Secondary structure																			T	T	S																					T	T		T	B	T																							T	T								S		B
Template Predicted Secondary structure
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.					.	.	.					.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																										.	.	.	.				.	.	.	.
Query SS confidence																																																										.	.	.	.				.	.	.	.
Query Sequence		V	L	P	S	K	L	T	N	I	L	A	V	G	G	N	A	V	I	T	A	E	A	Y	T	E	L	G	Q	L	C	E	T	F	P	G	I	A	V	C	V	E	P	E	S	V	E	A	L	V	A	G	I	R	Q	A	L	.	.	.	.	L	L	P	.	.	.	.	K	H	N	T	V	A	R	E	Y	A	E	R	T
Query Conservation																																																										.	.	.	.				.	.	.	.
Alig confidence																											.	.	.																													.	.	.	.				.	.	.	.
Template Conservation																											.	.	.
Template Sequence		A	F	G	L	T	V	V	E	A	M	T	C	G	L	P	T	F	A	T	C	K	G	G	P	A	.	.	.	E	I	I	V	H	G	K	S	G	F	H	I	D	P	Y	H	G	D	Q	A	A	D	T	L	A	D	F	F	T	K	C	K	E	D	P	S	H	W	D	E	I	S	K	G	G	L	Q	R	I	E	E	K
Template Known Secondary structure		S	S											T							S	S	B	T			.	.	.					B	T	T	T	B					T	T	S																			T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700				.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	E	N	V	L	R	Q	F	I	N	D	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	W	Q	I	Y	S	Q	R	L	L	T	L	T	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.