Job Description P32057 Confidence 99.86% Date Thu Jan 5 11:49:04 GMT 2012 Rank 27 Aligned Residues 380 % Identity 12% Template c3iaaB_ PDB info PDB header:transferase Chain: B: PDB Molecule:calg2; PDBTitle: crystal structure of calg2, calicheamicin glycosyltransferase, tdp2 bound form Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	V	Y	G	I	N	Y	S	P	E	L	T	G	I	G	K	Y	T	G	E	M	V	E	W	L	A	A	Q	G	H	E	V	R	V	I	T	A	P	P	Y	Y	P	Q	W	Q	V	G	E	N	Y	S	A	W	R	Y	K	R	E	E	G	A	A	T	V	W	R	C	P	L	Y	V	P	K	Q	P	S	T	L
Query Conservation
Alig confidence											.	.	.	.																										.	.	.
Template Conservation											.	.	.	.																										.	.	.
Template Sequence		H	L	L	I	V	N	V	A	S	.	.	.	.	H	G	L	I	L	P	T	L	T	V	V	T	E	L	V	R	R	G	H	R	V	S	Y	V	T	.	.	.	A	G	G	F	A	E	P	V	R	A	A	G	A	T	V	V	P	Y	Q	S	E	I	I	D	A	D	A	A	E	V	F	G	S	D	D	L	G	V	R
Template Known Secondary structure									S		.	.	.	.																	T	T								.	.	.		G	G	G							T	T									S	G	G	G							T	T	S		S	S
Template Predicted Secondary structure											.	.	.	.																										.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		K	R	L	L	H	L	G	S	F	A	V	S	S	F	F	P	L	M	A	Q	R	R	W	K	P	D	R	I	I	G	V	V	P	T	L	F	C	A	P	G	M	R	L	L	A	K	L	S	G	A	R	T	V	L	H	I	Q	D	Y	E	V	D	A	M	L	G	L	.	.	G	L	A	G	K	G	K	G	G	K	V
Query Conservation																																																																					.	.
Alig confidence																																																																					.	.
Template Conservation
Template Sequence		P	H	L	X	Y	L	R	E	N	V	S	V	L	R	A	T	A	E	A	L	D	G	D	V	P	D	L	V	L	Y	D	D	F	P	F	I	A	G	Q	L	L	A	A	R	W	R	R	P	A	V	R	L	S	A	A	F	A	S	N	E	H	Y	S	F	S	Q	D	X	V	T	L	A	G	T	I	D	P	L	D	L
Template Known Secondary structure																						S	S	S			S						S	T	T												T								S	S					S	S			T	T								T				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	A	T	A	F	E	R	S	G	L	H	N	V	D	N	V	S	T	I	S	R	S	M	M	N	K	A	I	E	K	G	V	A	A	E	N	V	I	F	F	P	N	W	S	E	I	A	R	F	Q	H	V	A	D	A	D	V	D	A	L	R	N	Q	L	D	L	P	D	N	K	K	I	I	L	Y	S	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	F	R	D	T	L	R	D	L	L	A	E	H	G	L	S	R	S	V	V	D	C	W	N	H	V	E	Q	L	N	L	V	F	V	P	K	A	F	Q	I	A	G	D	T	F	D	D	R	F	V	F	V	G	P	C	F	D	D	R	R	F	L	G	E	W	T	R	P	A	D	D	L	P	V	V	L	V	S	L
Template Known Secondary structure															T	T		S								T				S					S	S		T	T	T	S	T	T	G	G	G			T	T												G	G	G							S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	E	K	Q	G	L	E	N	V	I	E	A	A	D	R	L	R	D	E	P	L	I	F	A	I	V	G	Q	G	G	G	K	A	R	L	E	K	M	A	Q	Q	R	G	L	R	N	M	Q	F	F	P	L	Q	S	Y	D	A	L	P	A	L	L	K	M	G	D	C	H	L	V	V	Q	K	R	G	A	A	D	A
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	T	F	N	D	R	P	G	F	F	R	D	C	A	R	A	F	D	G	Q	P	W	H	V	V	X	T	L	G	G	Q	V	D	P	A	A	L	G	D	L	P	P	N	V	E	A	H	R	W	V	P	H	V	K	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	A	T	V	C	V	T	H
Template Known Secondary structure			S	S	S														T	T	T	S	S								T	T	S	S		G	G	G	G					T	T					S									.	.	.	.	.	.	.	.	.	.	.	.	.	.		T		S					S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.															.	.	.	.	.	.	.	300	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																									.	.	.	.																						.	.																												.	.	.
Query SS confidence																									.	.	.	.																						.	.																												.	.	.
Query Sequence		V	L	P	S	K	L	T	N	I	L	A	V	G	G	N	A	V	I	T	A	E	A	Y	.	.	.	.	T	E	L	G	Q	L	C	E	T	F	P	G	I	A	V	C	V	E	P	E	S	.	.	V	E	A	L	V	A	G	I	R	Q	A	L	L	L	P	K	H	N	T	V	A	R	E	Y	A	E	R	.	.	.
Query Conservation																									.	.	.	.																						.	.																												.	.	.
Alig confidence																									.	.	.	.			.	.	.																	.	.																												.	.	.
Template Conservation																															.	.	.
Template Sequence		G	G	X	G	T	L	X	E	A	L	Y	W	G	R	P	L	V	V	V	P	Q	S	F	D	V	Q	P	X	A	.	.	.	R	R	V	D	Q	L	G	L	G	A	V	L	P	G	E	K	A	D	G	D	T	L	L	A	A	V	G	A	V	A	A	D	P	A	L	L	A	R	V	E	A	X	R	G	H	V	R	R
Template Known Secondary structure													T	T									S	G	G	G					.	.	.						T	T	S						G	G	G															T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	K	E	N	V	L	R	Q	F	I	N	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	G	A	A	R	A	A	D	A	V	E	A	Y	L
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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