Phyre 2 alignment of P32057 with c3ia7A

Job Description P32057
Confidence 99.84% Date Thu Jan 5 11:49:04 GMT 2012

Rank 28 Aligned Residues 375

% Identity 11% Template c3ia7A_

PDB info PDB header:transferase Chain: A: PDB Molecule:calg4; PDBTitle: crystal structure of calg4, the calicheamicin glycosyltransferase

Resolution 1.91 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.
Query Sequence	M	K	I	L	V	Y	G	I	N	Y	S	P	E	L	T	G	I	G	K	Y	T	G	E	M	V	E	W	L	A	A	Q	G	H	E	V	R	V	I	T	A	P	P	Y	Y	P	Q	W	Q	V	G	E	N	Y	S	A	W	R	Y	K	R	E	E	G	A	A	T	V	W	R	C	P	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	R	H	I	L	F	A	N	V	.	.	.	.	Q	G	H	G	H	V	Y	P	S	L	G	L	V	S	E	L	A	R	R	G	H	R	I	T	Y	V	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	F	A	D	E	V	K	A	A	G	A	E	V	V	L	Y	K	S	E	F	D	T	F	H	V	P
Template Known Secondary structure									.	.	.	.	S	S																	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.										T	T									G	G	G	T	S	S	S	S
Template Predicted Secondary structure									.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	4	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.														40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	L	Y	V	P	K	Q	P	S	T	L	K	R	L	L	H	L	G	S	F	A	V	S	S	F	F	P	L	M	A	Q	R	R	W	K	P	D	R	I	I	G	V	V	P	T	L	F	C	A	P	G	M	R	L	L	A	K	L	S	G	A	R	T	V	L	H	I	Q	D	Y	E	V	D	A	M	L	G	L	G	L
Query Conservation	.
Alig confidence	.																																											.	.
Template Conservation																																												.	.
Template Sequence	E	V	V	K	Q	E	D	A	E	T	Q	L	H	L	V	Y	V	R	E	N	V	A	I	L	R	A	A	E	E	A	L	G	D	N	P	P	D	L	V	V	Y	D	V	.	.	F	P	F	I	A	G	R	L	L	A	A	R	W	D	R	P	A	V	R	L	T	G	G	F	A	A	N	E	H	Y	S	L	F	K	E
Template Known Secondary structure	S	S	S			T	T																									T	T				S						S	.	.	T	T												T								S	S				B	T	T	B
Template Predicted Secondary structure																																												.	.
Template SS confidence
	67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

	151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence	A	G	K	G	K	G	G	K	V	A	Q	L	A	T	A	F	E	R	S	G	L	H	N	V	D	N	V	S	T	I	S	R	S	M	M	N	K	A	I	E	K	G	V	A	A	E	N	V	I	F	F	P	N	W	S	E	I	A	R	F	Q	H	V	A	D	A	D	V	D	A	L	R	N	Q	L	D	L	P	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence	L	W	K	S	N	G	Q	R	H	P	A	D	V	E	A	V	H	S	V	L	V	D	L	L	G	K	Y	G	V	D	T	P	V	K	E	Y	W	D	E	I	E	G	L	T	I	V	F	L	P	K	S	F	Q	P	F	A	E	T	F	D	E	R	F	A	F	V	G	P	T	L	T	G	P	G	W	Q	P	P	R	P
Template Known Secondary structure						T				G	G	G	S													T	T	T			S							T				S					S	S		G	G	G	S	T	T	G	G	G			T	T																S	S	T
Template Predicted Secondary structure
Template SS confidence
	145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

	231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence	K	K	I	I	L	Y	S	G	N	I	G	E	K	Q	G	L	E	N	V	I	E	A	A	D	R	L	R	D	E	P	L	I	F	A	I	V	G	Q	G	G	G	K	A	R	L	E	K	M	A	Q	Q	R	G	L	R	N	M	Q	F	F	P	L	Q	S	Y	D	A	L	P	A	L	L	K	M	G	D	C	H	L	V
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.
Template Sequence	D	A	P	V	L	L	V	S	L	G	N	Q	F	N	E	H	P	E	F	F	R	A	C	A	Q	A	F	A	D	T	P	W	H	V	V	X	A	I	G	G	F	L	D	P	A	V	L	G	P	L	P	P	.	.	.	.	.	.	.	.	.	N	V	E	A	H	Q	W	I	P	F	H	S	V	L	A	H	A	R	A
Template Known Secondary structure	T										S		S	S														T	T	S	S									T	T	S		G	G	G	G		S			T	.	.	.	.	.	.	.	.	.	T					S									T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
	229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

	311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence	V	Q	K	R	G	A	A	D	A	V	L	P	S	K	L	T	N	I	L	A	V	G	G	N	A	V	I	T	A	E	A	Y	T	E	L	G	Q	L	C	E	T	F	P	G	I	A	V	C	V	E	P	E	S	.	.	V	E	A	L	V	A	G	I	R	Q	A	L	L	L	P	K	H	N	T	V	A	R	E	Y	A
Query Conservation																																																						.	.
Alig confidence																																			.	.	.																	.	.
Template Conservation																																			.	.	.
Template Sequence	C	L	T	H	G	T	T	G	A	V	L	E	A	F	A	A	G	V	P	L	V	L	V	P	H	F	A	T	E	A	A	P	S	A	.	.	.	E	R	V	I	E	L	G	L	G	S	V	L	R	P	D	Q	L	E	P	A	S	I	R	E	A	V	E	R	L	A	A	D	S	A	V	R	E	R	V	R	R	X	Q
Template Known Secondary structure																T	T							G	G	G		G	G	G					.	.	.						T	T	S						G	G	G		S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

	389	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence	E	R	.	.	.	T	L	D	K	E	N	V	L	R	Q	F	I	N	D	I	R
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence	R	D	I	L	S	S	G	G	P	A	R	A	A	D	E	V	E	A	Y	L	G
Template Known Secondary structure					T	S
Template Predicted Secondary structure
Template SS confidence
	377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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