Job Description P32057 Confidence 97.84% Date Thu Jan 5 11:49:04 GMT 2012 Rank 49 Aligned Residues 253 % Identity 11% Template c3hbmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:udp-sugar hydrolase; PDBTitle: crystal structure of pseg from campylobacter jejuni Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	L	V	Y	G	I	N	Y	S	P	E	L	T	G	I	G	K	Y	T	G	E	M	V	E	W	L	A	A	Q	G	H	E	V	R	V	I	T	A	P	P	Y	Y	P	Q	W	Q	V	G	E	N	Y	S	A	W	R	Y	K	R	E	E	G	A	A	T	V	W	R	C	P	L	Y	V	P	K	Q	P	S	T
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		X	K	V	L	F	R	S	D	S	S	S	Q	I	G	F	G	H	I	K	R	D	L	V	L	A	K	Q	Y	S	D	V	S	F	A	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	G	S	L	I	D	E	I	P	Y	P	V	Y	E	L	S	S	E	S	.	.	.	.	.	.
Template Known Secondary structure											B	T	T	T	B	S											T	T		S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			G	G	G			S						S	S	S		.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	R	L	L	H	L	G	S	F	A	V	S	S	F	F	P	L	M	A	Q	R	R	W	K	P	D	R	I	I	G	V	V	P	T	L	F	C	A	P	G	M	R	L	L	A	K	L	S	G	A	R	T	V	L	H	I	Q	D	Y	E	V	D	A	M	L	G	L	G	L	A	G	K	G	K	G	G	K	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	E	L	I	N	L	I	K	E	E	K	F	E	L	L	I	I	D	H	Y	G	I	S	V	D	D	E	K	L	I	K	L	E	T	G	V	K	I	L	S	F	D	D	E	I	K	P	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.												T		S							T	T																						S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	T	A	F	E	R	S	G	L	H	N	V	D	N	V	S	T	I	S	R	S	M	M	N	K	A	I	E	K	G	V	A	A	E	N	V	I	F	F	P	N	W	S	E	I	A	R	F	Q	H	V	A	D	A	D	V	D	A	L	R	N	Q	L	D	L	P	D	N	K	K	I	I	L	Y	S	G	N	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	I	L	L	N	V	N	A	Y	A	K	A	S	D	Y	E	G	L	V	P	K	C	E	V	R	C	G	F	S	Y	A	L	I	.	.	.	.	.	.	.	.	R	E	E	F	Y	Q	E	A	K	E	N	R	K	K	K	Y	D	F	F	I	C	X	G	G	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.		S						S	T	T			G	G	G	G	T	T	T									S	G	G	G				.	.	.	.	.	.	.	.								T	T															S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template SS confidence
															108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	K	Q	G	L	E	N	V	I	E	A	A	D	R	L	R	D	E	P	L	I	F	A	I	V	G	Q	G	G	G	K	A	R	L	E	K	M	A	Q	Q	R	G	L	R	N	M	Q	F	F	P	L	Q	S	Y	D	A	L	P	A	L	L	K	M	G	D	C	H	L	V	V	Q	K	R	G	A	A	D	A	V
Query Conservation
Alig confidence																				.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Sequence		D	I	K	N	L	S	L	Q	I	A	S	E	L	P	K	T	K	I	.	.	.	.	.	.	I	S	I	A	T	S	S	S	N	P	N	L	K	K	L	Q	K	F	A	K	L	H	N	N	I	R	L	F	I	D	H	E	N	I	A	K	L	X	N	E	S	N	K	L	I	I	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure			T	T										S		T	T	S		.	.	.	.	.	.							T	T		T	T										T		S	S						S		S								T							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.										.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	S	K	L	T	N	I	L	A	V	G	G	N	A	V	I	T	A	E	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	S	L	V	N	E	A	L	L	L	K	A	N	F	K	A	I	C	Y	V	K
Template Known Secondary structure		S	S									T	T									S	G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions