Job Description P32057 Confidence 99.97% Date Thu Jan 5 11:49:04 GMT 2012 Rank 14 Aligned Residues 312 % Identity 12% Template c2iv3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyltransferase; PDBTitle: crystal structure of avigt4, a glycosyltransferase involved2 in avilamycin a biosynthesis Resolution 2.3 Å

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		1	.	.	.	.	.	.	.	.	10													.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	L	V	Y	G	I	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	S	P	E	L	T	G	I	G	K	Y	T	G	E	M	V	E	W	L	A	A	Q	G	H	E	V	R	V	I	T	A	P	P	Y	Y	P	Q	W	Q	V	G	E	N	Y	S	A	W	R	Y	K	R	E	E	G	A	A	T	V	W
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	V	A	L	V	N	I	P	L	R	V	P	G	S	D	A	W	I	S	V	P	P	Q	G	Y	G	G	I	Q	W	V	V	A	N	L	M	D	G	L	L	E	L	G	H	E	V	F	L	L	G	A	P	S	P	G	R	P	G	L	T	V	V	P	A	G	E	P	E	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												B		T	T	S	S	S	B			S	S		S	S	S																	T	T							S							T	T					S			S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	P	L	Y	V	P	K	Q	P	S	T	L	K	R	L	L	H	L	G	S	F	A	V	S	S	F	F	P	L	M	A	Q	R	R	W	K	P	D	R	I	I	G	V	V	P	T	L	F	C	A	P	G	M	R	L	L	A	K	L	S	G	A	R	T	V	L	H	I	Q	D	Y	E	V	D	A	M	L	G	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	E	R	W	L	R	T	A	D	V	D	V	V	H	D	H	S	G	G	V	I	G	P	.	.	.	.	.	A	G	L	P	P	G	T	A	F	I	S	S	H	H	F	T	T	R	P	V	N	P	V	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S						S	S	S	S	S		S	.	.	.	.	.	T	T			T	T									S	S	S			S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
																													85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	G	K	G	K	G	G	K	V	A	Q	L	A	T	A	F	E	R	S	G	L	H	N	V	D	N	V	S	T	I	S	R	S	M	M	N	K	A	I	E	K	G	V	A	A	E	N	V	I	F	F	P	N	W	S	E	I	A	R	F	Q	H	V	A	D	A	D	V	D	A	L	R	N	Q	L	D	L	P
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	T	Y	S	S	R	A	Q	R	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	G	G	D	D	A	P	V	I	P	I	P	V	D	P	A	R	Y	R	S	A	A	D	Q	V
Template Known Secondary structure					S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T			T	T	S		B					B		G	G	G	S			G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.																																												.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	K	K	I	I	L	Y	S	G	N	I	G	E	K	Q	G	L	E	N	V	I	E	A	A	D	R	L	R	D	E	P	L	I	F	A	I	V	G	Q	G	G	G	K	A	R	L	E	K	M	A	Q	Q	R	G	L	R	N	M	Q	F	F	P	L	Q	S	Y	D	A	L	P	A	L	L	K	M	G	D	C	H
Query Conservation
Alig confidence																																																					.	.
Template Conservation																																																					.	.
Template Sequence		A	K	E	D	F	L	L	F	M	G	R	V	S	P	H	K	G	A	L	E	A	A	A	F	A	H	A	C	G	R	R	L	V	L	A	G	P	A	W	E	P	E	Y	F	D	E	I	T	R	R	Y	.	.	G	S	T	V	E	P	I	G	E	V	G	G	E	R	R	L	D	L	L	A	S	A	H	A	V	L	A
Template Known Secondary structure					S						S			S	G	G	G	T											T	T							S																.	.	T	T	T						S														S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	Q	K	R	G	A	A	D	A	V	L	P	S	K	L	T	N	I	L	A	V	G	G	N	A	V	I	T	A	E	A	Y	T	E	L	G	Q	L	C	E	T	F	P	G	I	A	V	C	V	E	P	E	S	V	E	A	L	V	A	G	I	R	Q	A	L	L	L	P	K	H	N	T	V	A	R	E	Y	A
Query Conservation
Alig confidence																																						.	.	.						.	.										.
Template Conservation																																						.	.	.						.	.										.
Template Sequence		M	S	Q	A	V	T	G	I	W	C	E	P	G	A	T	V	V	S	E	A	A	V	S	G	T	P	V	V	G	T	G	N	G	C	L	A	.	.	.	E	I	V	P	S	.	.	V	G	E	V	V	G	Y	G	T	.	D	F	A	P	D	E	A	R	R	T	L	A	G	L	P	A	S	D	E	V	R	R	A	A
Template Known Secondary structure														S										T	T								S	T	T			.	.	.			G	G	G	.	.	T						S	S	S	.													T	S
Template Predicted Secondary structure																																						.	.	.						.	.										.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.			.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	T	L	D	K	E	N	V	L	R	Q	F	I	N	D	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	L	W	G	H	V	T	I	A	E	R	Y	V	E	Q	Y	R
Template Known Secondary structure						B
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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