Job Description P77467 Confidence 100.00% Date Thu Jan 5 12:29:31 GMT 2012 Rank 15 Aligned Residues 256 % Identity 29% Template c3r0oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		M	E	F	I	L	S	H	V	E	K	G	V	M	T	L	T	L	N	R	P	E	R	L	N	S	F	N	D	E	M	H	A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	.	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D	P	T	G	P	A	P	D	L
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		R	Q	A	A	V	V	E	R	R	G	N	V	A	L	I	T	I	D	R	P	D	A	R	N	A	V	N	G	A	V	S	T	A	V	G	D	A	L	E	E	A	Q	R	D	P	E	V	W	A	V	V	I	T	G	A	G	D	K	S	F	C	A	G	A	D	L	K	A	I	S	R	G	E	N	L	Y	H	A	E	H
Template Known Secondary structure		S		S							T	T									G	G	G	T	T		B																			T	T									S	S	S	S	B	S				B							T	T				S		S	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	S	V	E	R	F	Y	N	P	L	V	R	R	L	A	K	L	P	K	P	V	I	C	A	V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	L	G	L	I	P	D	C	G	G	T	W	L	L	P	R	V	A	G	R	A	R	A
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	P	E	W	G	F	A	G	Y	V	H	H	F	I	D	K	P	T	I	A	A	V	N	G	T	A	L	G	G	G	S	E	L	A	L	A	S	D	L	V	I	A	C	E	S	A	S	F	G	L	P	E	V	K	R	G	L	I	A	G	A	G	G	V	F	R	I	V	E	Q	L	P	R	K	V	A
Template Known Secondary structure		.	.	.	.	.	G	G	G		G	G	G	T	T	T				S	S								S	B			T									S	S						T	T						G	G	G	G	T	T	S			T	T	T									S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		M	G	L	A	L	L	G	N	Q	L	S	A	E	Q	A	H	E	W	G	M	I	W	Q	V	V	D	D	E	T	L	A	D	T	A	Q	Q	L	A	R	H	L	A	T	Q	P	T	F	G	L	G	L	I	K	Q	A	I	N	S	A	E	.	.	.	T	N	T	L	D	T	Q	L	D	L	E	R	D	Y	Q	R	L
Query Conservation																																																														.	.	.
Alig confidence																																																														.	.	.
Template Conservation
Template Sequence		L	E	L	V	L	T	G	E	P	M	T	A	S	D	A	L	R	W	G	L	I	N	E	V	V	P	D	G	T	V	V	E	A	A	L	A	L	A	E	R	I	T	C	N	A	P	L	S	V	Q	A	S	K	R	V	A	Y	G	A	D	D	G	I	I	G	A	E	E	P	K	W	E	R	T	I	R	E	F	T	E
Template Known Secondary structure																				T	S	S	S					T	T															T	S														T			T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	S	A	D	Y	R	E	G	V	S	A	F	L	A	K	R	S	P	Q	F	T	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	K	S	E	D	A	K	E	G	P	L	A	F	A	E	K	R	Q	P	V	W	K	A	R
Template Known Secondary structure				T	S											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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