Job Description P77467 Confidence 100.00% Date Thu Jan 5 12:29:31 GMT 2012 Rank 70 Aligned Residues 249 % Identity 15% Template c3m6nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.																.
Query SS confidence																																								.	.	.	.																.
Query Sequence		I	L	S	H	V	E	K	G	V	M	T	L	T	L	N	R	P	E	R	L	N	S	F	N	D	E	M	H	A	Q	L	A	E	C	L	K	Q	V	.	.	.	.	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	.	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D	P	T	G	P	A	P	D
Query Conservation																																								.	.	.	.																.
Alig confidence																.																								.	.	.	.																.
Template Conservation																.
Template Sequence		I	I	E	E	P	Q	R	D	V	Y	W	I	H	M	.	H	A	D	L	R	A	C	F	S	T	R	L	V	D	D	I	T	G	Y	Q	T	N	L	G	Q	R	L	N	T	A	G	V	L	A	P	H	V	V	L	A	S	D	S	D	V	F	N	L	G	G	D	L	A	L	F	C	Q	L	I	R	E	G	D	R	A
Template Known Secondary structure						T	T	T	T							.		T	T				S	B																							T		S	S								S	S	S	S	S	B			B												T
Template Predicted Secondary structure																.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		L	G	M	S	V	E	R	F	Y	N	P	L	.	.	.	V	R	R	L	A	K	L	P	K	P	V	I	C	A	V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	L	G	L	I	P	D	C	G	G	T	W	L	L	P	R	V	A	G
Query Conservation														.	.	.
Alig confidence														.	.	.
Template Conservation
Template Sequence		R	L	L	D	Y	A	Q	R	C	V	R	G	V	H	A	F	H	V	G	L	G	A	R	A	H	S	I	A	L	V	Q	G	N	A	L	G	G	G	F	E	A	A	L	S	C	H	T	I	I	A	E	E	G	V	M	M	G	L	P	E	V	L	F	D	L	F	P	G	M	G	A	Y	S	F	M	C	Q	R	I	S
Template Known Secondary structure																			T	G	G	G	T	T									S				T									S	S						T	T						G	G	G	G	G	T					S	S						T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	R	A	M	G	L	A	L	L	G	N	Q	L	S	A	E	Q	A	H	E	W	G	M	I	W	Q	V	V	D	D	E	T	L	A	D	T	A	Q	Q	L	A	R	H	L	A	T	Q	P	T	F	G	L	G	L	I	K	Q	A	I	N	S	A	E	T	N	T	L	D	T	Q	L	D	L	E	R	D	Y	Q	R
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		A	H	L	A	Q	K	I	M	L	E	G	N	L	Y	S	A	E	Q	L	L	G	M	G	L	V	D	R	V	V	P	R	G	Q	G	V	A	A	V	E	Q	V	I	R	E	S	K	.	R	T	P	H	A	W	A	A	M	Q	Q	V	R	E	M	T	T	A	V	P	L	E	E	M	M	R	I	T	E	I	W	V	D
Template Known Secondary structure																								T	S		S					T	T														T	.	T														T	T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	R	S	A	D	Y	R	E	G	V	S	A	F	L	A	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	M	Q	L	G	E	K	S	L	R	T	M	D	R	L	V	R	A
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions