Return to main results Retrieve Phyre Job Id

Job DescriptionP77467
Confidence99.15%DateThu Jan 5 12:29:31 GMT 2012
Rank81Aligned Residues147
% Identity17%Templatec3kthD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  TLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRR
Query Conservation   



 
   


       
   
     
  
  


 
 
  



 

                        
   
Alig confidence 






.....


























....












...................




Template Conservation 

 
 
 .....
       
   
           
 
.... 





 
    ................... 
   
Template Sequence  IIMLGSA. . . . . IDDNVANSIVSQLLFLAAEDPEKEISL. . . . YINSPGGSITAGM. . . . . . . . . . . . . . . . . . . AIYDT
Template Known Secondary structure 
S
.....B

SSS
....

B
...................
Template Predicted Secondary structure 


.....






....




...................
Template SS confidence 















































































   28.30.... .....40.........50.........60. ........70.... .....
 
   95....100.........110.........120.. .......130.........140..... ....150.....
Predicted Secondary structure 






..










.................
Query SS confidence 



























. .






















. . . . . . . . . . . . . . . . .









Query Sequence  LAKLPKPVICAVNGVAAGAGATLALGGD. . IVIAARSAKFVMAFSKLGLIPDC. . . . . . . . . . . . . . . . . GGTWLLPRVA
Query Conservation 
    






 
 
 


  


  
.. 


        

   
  
  .................     
    
Alig confidence 



























..






















.................









Template Conservation 
     

   
 
 



   
  
 

                     
                             
Template Sequence  MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
Template Known Secondary structure  SSS
TS
TT

TT








SS

Template Predicted Secondary structure 































Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   156...160.........170.........180.........
Predicted Secondary structure 















Query SS confidence 

































Query Sequence  GRARAMGLALLGNQLSAEQAHEWGMIWQVVDDET
Query Conservation 
   
  
 
 
    
 

   


  
     
Alig confidence 

































Template Conservation      
          
  

   



 

    
Template Sequence  PLEVIERDTDRDNFKSAEEALEYGLIDKILTHLE
Template Known Secondary structure 
TSS
TS
S




Template Predicted Secondary structure 














Template SS confidence 

































   160.........170.........180.........190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions