Job Description P77467 Confidence 97.44% Date Thu Jan 5 12:29:31 GMT 2012 Rank 112 Aligned Residues 164 % Identity 16% Template c3glmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	N	D	E	M	H	A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D	P	T	G	P	A	P	D	L	G	M	S	V	E	R	F	Y	N	P	L	V	R	R	L	A	K	L	P	K	P	V	I	C	A
Query Conservation
Alig confidence																					.														.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.														.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	Y	R	Q	G	L	I	K	M	N	E	F	V	T	L	C	A	R	.	D	R	I	P	L	I	W	L	Q	D	T	T	G	.	I	D	V	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	K	A	E	L	L	G	L	G	Q	S	L	I	Y	S	I	E	N	S	K	L	P	S	L	E	I
Template Known Secondary structure																					.	T	T												.				S		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T																	S
Template Predicted Secondary structure																					.														.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.														.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.								.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	L	G	L	I	P	D	C	G	G	T	W	L	L	.	.	.	.	.	.	.	P	R	V	A	G	R	A	R	A	M	G	L	A	L	L	G	N	Q	L	S	A	E	Q	A	H	E	W
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence											.																																					.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		T	I	R	K	A	S	A	A	A	.	H	Y	V	L	G	G	P	Q	G	N	N	T	N	V	F	S	I	G	T	G	A	C	E	Y	Y	V	M	P	G	E	T	A	A	N	A	M	Y	S	R	K	L	V	K	A	Q	P	I	I	G	K	M	N	D	M	I	Q	M	Y	T	D	K	S	R	P	K	Y	C	T	E	K
Template Known Secondary structure			S	S							.				T	T		T	T		T	T	T								T	T					S	S																																		T	T	S							T
Template Predicted Secondary structure											.
Template SS confidence
		453	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	I	W	Q	V	V	D	D	E	T	L	A	D	T	A	Q	Q	L	A	R	H	L	A	T	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	M	V	D	E	I	V	D	M	T	E	V	R	P	Y	I	Q	A	F	T	E	A	A	Y	Q	N	P
Template Known Secondary structure		T	S	S	S					T	T	T													T	T	S
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions