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Job DescriptionP77467
Confidence99.42%DateThu Jan 5 12:29:31 GMT 2012
Rank77Aligned Residues170
% Identity16%Templatec3bezC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals
Resolution2.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30. ........40.........50.........60.........70.........80.....
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Query Sequence  HVEKGVMTLTLNRPERLNSFNDEM. . HAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVE
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Template Sequence  DTGDSIGVVFANGAIXDGEETQGNVGGDTTAAQIRDARLDPKVKAIVL. . . . RVNSPGGS. . . . . . . . . . . . . . . . VTAS
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   323......330.........340.........350.........360.........370 ........ .380..
 
   86...90.........100.........110.........120.........130.........140.........150.
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Query Sequence  RFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLL. . . . . . . . . . . . . .
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Template Sequence  EVIRAELAAARAAGKPVVVSXGGXAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLAD
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TTTTT
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GGG
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   383......390.........400.........410.........420.........430.........440.........450.........460..
 
   152.......160.........170.........180.........190........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLA
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Template Sequence  VSITRALPPEAQLXXQLSIENGYKRFITLVADARHSTPEQIDK. IAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELA
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   463......470.........480.........490.........500..... ....510.........520.........530.........540
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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