Job Description P77467 Confidence 99.42% Date Thu Jan 5 12:29:31 GMT 2012 Rank 77 Aligned Residues 170 % Identity 16% Template c3bezC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals Resolution 2.76 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		H	V	E	K	G	V	M	T	L	T	L	N	R	P	E	R	L	N	S	F	N	D	E	M	.	.	H	A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D	P	T	G	P	A	P	D	L	G	M	S	V	E
Query Conservation																										.	.
Alig confidence																										.	.																							.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	G	D	S	I	G	V	V	F	A	N	G	A	I	X	D	G	E	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	.	.	.	.	R	V	N	S	P	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	A	S
Template Known Secondary structure				S										S	S			S	S	S			T	T	S																	T	T							.	.	.	.							B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370					.	.	.	.	.	.	.	.																	.	380	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	Y	N	P	L	V	R	R	L	A	K	L	P	K	P	V	I	C	A	V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	L	G	L	I	P	D	C	G	G	T	W	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V	V	V	S	X	G	G	X	A	A	S	G	G	Y	W	I	S	T	P	A	N	Y	I	V	A	N	P	S	T	L	T	G	S	I	G	I	F	G	V	I	T	T	V	E	N	S	L	D	S	I	G	V	H	T	D	G	V	S	T	S	P	L	A	D
Template Known Secondary structure														T	T													T					T	T	T	T		S						T	T																						T	T								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
																																		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	V	A	G	R	A	R	A	M	G	L	A	L	L	G	N	Q	L	S	A	E	Q	A	H	E	W	G	M	I	W	Q	V	V	D	D	E	T	L	A	D	T	A	Q	Q	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																													.
Template Sequence		V	S	I	T	R	A	L	P	P	E	A	Q	L	X	X	Q	L	S	I	E	N	G	Y	K	R	F	I	T	L	V	A	D	A	R	H	S	T	P	E	Q	I	D	K	.	I	A	Q	G	H	V	W	T	G	Q	D	A	K	A	N	G	L	V	D	S	L	G	D	F	D	D	A	V	A	K	A	A	E	L	A
Template Known Secondary structure				T	T	S																														T									.	T		T	T											T	S	S		S															S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.		.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions