Job Description P77467 Confidence 25.42% Date Thu Jan 5 12:29:31 GMT 2012 Rank 140 Aligned Residues 82 % Identity 21% Template c2zbkA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type ii dna topoisomerase vi subunit a; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms Resolution 3.56 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	.	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D	P	T	G	P	A	P	D	L	G	M	S	V	E	R	F	Y	N	P	L	V	R	R	L	A	K	L	P	K	P	V	I	C	A	V	N	G	V	A	A
Query Conservation																											.
Alig confidence																											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Sequence		D	A	V	F	Q	Q	L	H	R	A	G	F	W	K	Q	Y	K	S	I	L	I	T	S	A	G	Q	P	D	R	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	F	V	R	R	L	N	E	.	.	.	.	.	.	E	L	K	L	P	V	Y	I	L	T	D	A	D	P	Y
Template Known Secondary structure										T	T	T					T	T								S	S			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.		S										S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																				.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	.	L	G	L	I	P
Query Conservation																													.
Alig confidence				.	.	.	.																						.
Template Conservation				.	.	.	.
Template Sequence		G	W	.	.	.	.	Y	I	F	S	V	F	R	I	G	S	I	S	E	R	L	A	T	P	D	A	K	F	L	G	V	S	M
Template Known Secondary structure				.	.	.	.							T	S		S						S		S	S
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		266	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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