Job Description P77467 Confidence 100.00% Date Thu Jan 5 12:29:31 GMT 2012 Rank 66 Aligned Residues 240 % Identity 25% Template c2pg8C_ PDB info PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.
Query Sequence		M	E	F	I	L	S	H	V	E	K	G	V	M	T	L	T	L	N	R	P	E	R	L	N	S	F	N	D	E	M	H	A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	.	.	.	.	.	.	.	.	.	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D
Query Conservation																																																										.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	E	A	V	H	L	E	R	R	D	G	V	A	R	L	T	M	C	R	D	D	R	L	N	A	E	D	G	Q	Q	V	D	D	M	E	T	A	V	D	L	A	L	L	D	P	G	V	R	V	G	L	L	R	G	G	V	M	S	H	P	R	Y	R	G	K	R	V	F	S	A	G	I	N	L	K	Y	L	S	Q	G
Template Known Secondary structure			S	S	B						T	T									T	T	T	T	T		B		T	T																T	T										B			S	G	G	G	T	T		B						B								T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	G	P	A	P	D	L	G	M	S	V	E	R	F	Y	N	P	L	V	R	.	.	.	.	.	.	.	.	.	.	.	.	R	L	A	K	L	P	K	P	V	I	C	A	V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	L	G
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	S	L	V	D	F	L	M	R	K	E	L	G	Y	I	H	K	L	V	R	G	V	L	T	N	D	D	R	P	G	W	W	H	S	P	R	I	E	K	P	W	V	A	A	V	D	G	F	A	I	G	G	G	A	Q	L	L	L	V	F	D	R	V	L	A	S	S	D	A	Y	F	S	L	P	A	A	K	E	G
Template Known Secondary structure					T	T	T	T							T													T	T	S	T	T	T	T	T		S											S	S				T						T	T	S		S						T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	P	D	C	G	G	T	W	L	L	P	R	V	A	G	R	A	R	A	M	G	L	A	L	L	G	N	Q	L	S	A	E	Q	A	H	E	W	G	M	I	W	Q	V	V	D	D	E	T	L	A	D	T	A	Q	Q	L	A	R	H	L	A	T	Q	P	T	F	G	L	G	L	I	K	Q	A	I	N	S	A	E
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		I	I	P	G	A	A	N	L	.	R	L	G	R	F	A	G	P	R	V	S	R	Q	V	I	L	E	G	R	R	I	W	A	K	E	P	E	A	R	L	L	V	D	E	V	V	E	P	D	E	L	D	A	A	I	E	R	S	L	T	R	L	D	G	D	A	V	L	A	N	R	R	M	L	N	L	A	D	E	S	P
Template Known Secondary structure					T	T				.																T	S						T	T	S	G	G	G	G	G	T		S					T	T	T										G	G	G		S															S
Template Predicted Secondary structure										.
Template SS confidence
		324	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	T	L	D	T	Q	L	D	L	E	R	D	Y	Q	R	L	A	G	R	S	A	D
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		D	G	.	F	R	A	Y	M	A	E	F	A	L	M	Q	A	L	R	L	Y	G	H	D
Template Known Secondary structure				.																	T		T	T
Template Predicted Secondary structure				.
Template SS confidence
		403	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions