Job Description P77467 Confidence 100.00% Date Thu Jan 5 12:29:31 GMT 2012 Rank 43 Aligned Residues 254 % Identity 22% Template c2d3tB_ PDB info PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v Resolution 3.40 Å

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		1	.	.			.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure					.	.							.																.
Query SS confidence					.	.							.																.
Query Sequence		M	M	E	.	.	F	I	L	S	H	V	.	E	K	G	V	M	T	L	T	L	N	R	P	E	R	L	.	N	S	F	N	D	E	M	H	A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D	P	T	G	P
Query Conservation					.	.							.																.
Alig confidence					.	.							.																.																																																.
Template Conservation																																																																													.
Template Sequence		I	Y	E	G	K	A	I	T	V	T	A	L	E	S	G	I	V	E	L	K	F	D	L	K	G	E	S	V	N	K	F	N	R	L	T	L	N	E	L	R	Q	A	V	D	A	I	K	A	D	A	S	V	K	G	V	I	V	S	S	G	K	D	V	F	I	V	G	A	D	I	T	E	F	V	E	.	N	F	K	L
Template Known Secondary structure						S	S							G	G	G									T	T	S	S	S		B																	T	T		T	T									S	S	S	S	S	B	B										.		T	S	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	D	L	G	M	S	V	E	R	F	Y	N	P	L	V	R	R	L	A	K	L	P	K	P	V	I	C	A	V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	L	G	L	I	P	D	C	G	G	T	W	L	L	P	R	V	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	A	E	L	I	A	G	N	L	E	A	N	K	I	F	S	D	F	E	D	L	N	V	P	T	V	A	A	I	N	G	I	A	L	G	G	G	L	E	M	C	L	A	A	D	F	R	V	M	A	D	S	A	K	I	G	L	P	E	V	K	L	G	I	Y	P	G	F	G	G	T	V	R	L	P	R	L	I	G
Template Known Secondary structure																						S		S	S								S				T									S	S						T	T						G	G	G	G	G	T				T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	R	A	M	G	L	A	L	L	G	N	Q	L	S	A	E	Q	A	H	E	W	G	M	I	W	Q	V	V	D	D	E	T	L	A	D	T	A	Q	Q	L	A	R	H	L	A	T	Q	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	N	A	V	E	W	I	A	S	G	K	E	N	R	A	E	D	A	L	K	V	S	A	V	D	A	V	V	T	A	D	K	L	G	A	A	A	L	D	L	I	K	R	A	I	S	G	E	L	D	Y	K	A	K	R	Q	P	K	L	E	K	L	K	L	N	A	I	E	Q	M	M	A	F	E	T	A	K	G	F
Template Known Secondary structure															B								T	T	S	S	S					T	T	T														S	S	S	S							G	G	G	G	S			S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
											207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	F	G	L	G	L	I	K	Q	A	I	N	S	A	E	T	N	T	L	D	T	Q	L	D	L	E	R	D	Y	Q	R	L	A	G	R	S	A	D	Y	R	E	G	V	S	A	F	L	A	K	R
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	G	Q	A	G	P	N	Y	P	A	P	V	E	A	I	K	T	I	Q	K	A	A	N	F	G	R	D	K	A	L	E	V	E	A	A	G	F	A	K	L	A	K	T	S	A	S	N	C	L	I	G	L	F	L	N	D	Q
Template Known Secondary structure						T		T	T														G	G	G	S																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions