Job Description P77467 Confidence 98.26% Date Thu Jan 5 12:29:31 GMT 2012 Rank 100 Aligned Residues 149 % Identity 17% Template c1x0uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii Resolution 2.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	T	L	T	L	N	R	P	E	R	L	N	S	F	N	D	E	M	H	A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D	P	T	G	P	A	P	D	L	G	M	S	V	E	R	F	Y	N	P	L	V
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	A	Y	A	Q	D	F	T	V	L	G	G	S	L	G	E	T	H	A	N	K	I	V	R	A	Y	E	L	A	L	K	V	G	A	P	V	V	G	I	N	D	S	G	G	A	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	G	A	L	S	L	E	G	Y	G	A	V	F
Template Known Secondary structure									T	T	T	G	G	G		B																			T											S	B		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																			.	.	.	.	.	.	.	.	150	.	.	.	.	.
		93	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																															.	.
Query SS confidence									.	.																															.	.
Query Sequence		R	R	L	A	K	L	P	.	.	K	P	V	I	C	A	V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	.	.	A	K	F	V	M	A	F	S	K	L	G	L	I	P	D	C	G	G	T	W	L	L	P	R	V	A	G	R	A	R	A	M	G	L	A	L	L	G	N
Query Conservation									.	.																															.	.
Alig confidence									.	.																															.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		K	M	N	V	M	A	S	G	V	I	P	Q	I	T	I	M	A	G	P	A	A	G	G	A	V	Y	S	P	A	L	T	D	F	I	I	M	I	K	G	D	A	Y	Y	M	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	G	P	E	I	T	K	V	V	.	.	L	G	E
Template Known Secondary structure								T	T	T	S								S				G	G	G	G						S	S							S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S							.	.	S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																					.	.	.	.	.	.	.	.	.	210			.	.	.
		169	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure								.	.	.	.	.	.	.																.
Query SS confidence								.	.	.	.	.	.	.																.
Query Sequence		Q	L	S	A	E	Q	.	.	.	.	.	.	.	A	H	E	W	G	M	I	W	Q	V	V	D	D	E	T	.	L	A	D	T	A	Q	Q	L	A	R	H	L
Query Conservation								.	.	.	.	.	.	.																.
Alig confidence								.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		E	V	S	F	Q	D	L	G	G	A	V	V	H	A	T	K	S	G	V	V	H	F	M	V	D	S	E	Q	E	A	I	N	L	T	K	R	L	L	S	Y	L
Template Known Secondary structure										B							T	T				S				S	S															S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions