Job Description P77467 Confidence 98.18% Date Thu Jan 5 12:29:31 GMT 2012 Rank 103 Aligned Residues 165 % Identity 16% Template c1vrgE_ PDB info PDB header:ligase Chain: E: PDB Molecule:propionyl-coa carboxylase, beta subunit; PDBTitle: crystal structure of propionyl-coa carboxylase, beta subunit (tm0716)2 from thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	T	L	T	L	N	R	P	E	R	L	N	S	F	N	D	E	M	H	A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	R	G	F	C	A	G	Q	D	L	N	D	R	N	V	D	P	T	G	P	A	P	D	L	G	M	S	V	E	R	F	Y	N	P	L	V
Query Conservation
Alig confidence																																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	I	V	A	N	Q	P	S	V	L	A	G	V	L	D	I	D	S	S	D	K	A	A	R	F	I	R	F	L	D	A	.	F	N	I	P	I	L	T	F	V	D	T	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	P	G	V	A	Q	E	H	G	G	I	I	R	H	G	A	K	L	L
Template Known Secondary structure									T	T	S	G	G	G		B																		.	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	B									T	T
Template Predicted Secondary structure																																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.															.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.															.	.	.
Predicted Secondary structure																														.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	L	A	K	L	P	K	P	V	I	C	A	V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	.	.	.	.	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	L	G	L	I	P	D	C	G	G	T	W	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	V
Query Conservation																														.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.															.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		Y	A	Y	S	E	A	T	V	P	K	I	T	V	I	L	R	K	A	Y	G	G	A	Y	I	A	X	G	S	K	H	L	G	A	D	X	V	L	A	W	P	S	A	E	I	A	V	.	.	.	.	.	.	.	X	G	P	E	G	A	A	N	I	I	F	K	R	E	I	E	A	S	S	N	P	E	E	T	R	R	K
Template Known Secondary structure									S																		T	T		G	G	G	T		S						T	T					S	.	.	.	.	.	.	.	S										T						S	S	S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430								.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	A	R	A	M	G	L	A	L	L	G	N	Q	L	S	A	E	Q	A	H	E	W	G	M	I	W	Q	V	V	D	D	E	T	L	A	D	T	A	Q	Q	L	A	R	H	L	A	T	Q	P
Query Conservation
Alig confidence												.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		L	I	E	E	Y	K	Q	Q	F	A	.	.	.	.	.	.	N	P	Y	I	A	A	S	R	G	Y	V	D	X	V	I	D	P	R	E	T	R	K	Y	I	X	R	A	L	E	V	C	E	T	K	V
Template Known Secondary structure											S	.	.	.	.	.	.	S							T	T	S	S	S					G	G	G													T	T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		458	.	460	.	.	.	.	.	.	.							.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions