Return to main results Retrieve Phyre Job Id

Job DescriptionP33997
Confidence62.91%DateThu Jan 5 11:53:00 GMT 2012
Rank170Aligned Residues48
% Identity10%Templated1zk8a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60........
Predicted Secondary structure 























Query SS confidence 


























































Query Sequence  LRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDEWLSQRCK
Query Conservation 

   
    







           
 

 




 
 
 
   

  

  
  
Alig confidence 



















...........



























Template Conservation   
   

   


   

  ...........
  
  
               
  
  
Template Sequence  VTLASLAQTLGVRSPSLYNH. . . . . . . . . . . VKGLQDVRKNLGIYGIKKLHNRLEEAAE
Template Known Secondary structure 

TS
TTT...........
SS
Template Predicted Secondary structure 






...........



Template SS confidence 


























































   2930.........40........ .50.........60.........70......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions