Return to main results Retrieve Phyre Job Id

Job DescriptionP33997
Confidence92.40%DateThu Jan 5 11:53:00 GMT 2012
Rank12Aligned Residues26
% Identity27%Templated1umqa_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like FIS-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30......
Predicted Secondary structure 








Query SS confidence 

























Query Sequence  RLPAVIQKTGMARATIYDWLNPKSPR
Query Conservation 
   
    







         
Alig confidence 

























Template Conservation 
   

  




 

 




   
Template Sequence  NVSETARRLNMHRRTLQRILAKRSPR
Template Known Secondary structure 
TS
TSS

Template Predicted Secondary structure 






Template SS confidence 

























   56...60.........70.........80.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions