Return to main results Retrieve Phyre Job Id

Job DescriptionP33997
Confidence94.90%DateThu Jan 5 11:53:00 GMT 2012
Rank6Aligned Residues46
% Identity13%Templatec3gp4B_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, merr family; PDBTitle: crystal structure of putative merr family transcriptional regulator2 from listeria monocytogenes
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.
Predicted Secondary structure 























Query SS confidence 



















































Query Sequence  LRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDE
Query Conservation 

   
    







           
 

 




 
 
 
   

  
Alig confidence 






















......






















Template Conservation 


 


   


  





  ......


 
  
   
 
 
   

  
Template Sequence  LNIKEASEKSGVSADTIRYYERI. . . . . . GLIPPIHRNESGVRKFGAEDLRW
Template Known Secondary structure  B
TS
......TSS



TTS
B
Template Predicted Secondary structure 




......
















Template SS confidence 



















































   1920.........30.........40. ........50.........60....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions