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Job DescriptionP31471
Confidence98.64%DateThu Jan 5 11:48:00 GMT 2012
Rank218Aligned Residues189
% Identity19%Templatec3qitB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:polyketide synthase; PDBTitle: thioesterase domain from curacin biosynthetic pathway
Resolution1.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160.........170.........180.........190.........200.........210.........220.
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Query Sequence  DLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTET
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Template Sequence  AMEEKFLEF. . GGNQICLCSWGSPE. . . . . . . HPVVLCIHGILEQGLAW. . . . . . QEVALPLAAQG. . . . YRVVAPDLFG
Template Known Secondary structure 

..TTS
TT.......S


TT

GGGG......TT....


TT
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   0........ .10.........20.. .......30......... 40.........50 .........60
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  DAKGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLAT
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Template Sequence  HGRSSHLEMVT. . . . . . . . . . . . . SYSSLTFLAQIDRVIQEL. . . . . PDQPLLLVGHSMGAMLATAIASVRPKKIKELIL
Template Known Secondary structure  STTS


SSGG.............G
SS.....
SS
T
GGG
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   61........70. ........80......... 90.........100.........110.........120..
 
   302.......310.
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Query Sequence  FSGVTTTTVP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                                                  
Template Sequence  VELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAII
Template Known Secondary structure  S








S

T






BSSSTTS
TTT
S
GGG
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   123......130.........140.........150.........160.........170.........180.........190.........200..
 
   312.......320.........330.........340.........350.........360.........370.
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Query Sequence  . . . . . . DEGVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKINFDYQEYPGLNH
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Template Conservation                           


 
 
  
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Template Sequence  RTILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRP. . . EDLQQQKMTMTQAKRVFLSG. GH
Template Known Secondary structure 




TTS
TT


S
TT

SS
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TT
SS.SS
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   203......210.........220.........230.........240.. .......250.........260.. ..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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